G38252


Basic Information

Item Value
gene id G38252
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035900.1
NCBI id CM008303.1
chromosome length 25652880
location 21317103 ~ 21317345 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU51579
aaaaatatgggggataaaaacaccaaaaatccggggtgaatatgtctcgtcggtcagagcaaattgaacatttttcagtggattaaaggggccgtgatttgcttttttttacctctttttttaaaaacgaatattcgaatattcgcttcgaatcagtgccgaatatccggagctcaaaaaacgctattcgggccagccct

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU51579 True 200 lncRNA 0.40 2 21317103 21317345

Neighbor

gene id symbol gene type direction distance location
LOC103035971 fra10ac1,LOC108274300,LOC108431384 coding downstream 211796 21082664 ~ 21105307 (-)
rbp4 rbp4 coding downstream 269090 21044501 ~ 21048013 (-)
kif22 kif22,LOC107664627,LOC107654032 coding downstream 286936 21019121 ~ 21030167 (-)
LOC103035258 NA coding downstream 298850 21003600 ~ 21018253 (-)
lmf1 lmf1,LOC107580192 coding downstream 326985 20981405 ~ 20990118 (-)
tbc1d12 tbc1d12 coding upstream 7083 21324428 ~ 21349420 (-)
LOC103036789 LOC108431390,LOC108274191,LOC107654041 coding upstream 43893 21361238 ~ 21390673 (-)
LOC103039938 NA coding upstream 76443 21393788 ~ 21404557 (-)
LOC103040573 NA coding upstream 163416 21480761 ~ 21579767 (-)
LOC103029147 LOC108443253 coding upstream 318745 21636090 ~ 21644027 (-)
G38246 NA non-coding downstream 25899 21289848 ~ 21291204 (-)
G38239 plce1 non-coding downstream 37664 21264937 ~ 21279439 (-)
G38222 NA non-coding downstream 175991 21140719 ~ 21141112 (-)
G38204 NA non-coding downstream 273214 21043450 ~ 21043889 (-)
G38205 NA non-coding downstream 282056 21031923 ~ 21035047 (-)
G38231 NA non-coding upstream 4364 21321709 ~ 21324160 (-)
G38257 NA non-coding upstream 41809 21359154 ~ 21359562 (-)
G38291 NA non-coding upstream 266271 21583616 ~ 21608302 (-)
G38302 NA non-coding upstream 461307 21778652 ~ 21778910 (-)
G38342 NA non-coding upstream 522449 21839794 ~ 21840799 (-)
slc39a11 slc39a11,s39ab,LOC107653972,LOC107693650 other downstream 637672 20511671 ~ 20679431 (-)
c4h10orf128 NA other downstream 1491451 19818268 ~ 19825652 (-)
LOC103045068 antxrl,antxr1c,LOC108437311,LOC105893913,LOC106589351,LOC107720085 other downstream 1715819 19544225 ~ 19601284 (-)
G37616 NA other downstream 2682005 18633578 ~ 18635098 (-)
G37603 NA other downstream 2743927 18572691 ~ 18573176 (-)
G38338 g6pc,g6pca.2,LOC107682718 other upstream 555975 21873320 ~ 21878377 (-)
a1cf a1cf,LOC107654048 other upstream 696160 22013505 ~ 22038504 (-)
ube2d1 ube2d1,ube2d1b,LOC105891213,LOC107583697,LOC108431657,LOC107733527,LOC107717106,LOC107553913,LOC106607701 other upstream 2063300 23380645 ~ 23387442 (-)
LOC111192393 NA other upstream 2147874 23465219 ~ 23510619 (-)
fam13c phyhipl,phyhiplb,fam13c other upstream 2365781 23683126 ~ 23720782 (-)

Expression


Co-expression Network