g6pc (g6pc,g6pca.2,LOC106579337)


Basic Information

Item Value
gene id g6pc
gene name g6pc,g6pca.2,LOC106579337
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035900.1
NCBI id CM008303.1
chromosome length 25652880
location 21873312 ~ 21878213 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007233994.3
GCTCTGGAGTGTCAGTTGCATCTCTCTTATCCACAGACAGATAGCTTTCTCTAAAGGGAACATCTTCAGGATGAACACAGTCATGGATGCTATGCATGGCTATGGGGTGAGCAGCACCCAGTACCTGCAGACCCACTACAGAGACGCCCAGAGCTGGTTCCTCTTCGTATCCTTCGCTGCAGACCTGAGGAACACCTTCTTCGTCTTCTTTCCCATCTGGTTCCATCTGAGGGAGTCTGTAGGCATCAAGCTTATATGGGTGGCAGTGGTGGGAGACTGGCTCAACTTGGTGTTTAAATGGATCCTGTTTGGAGAACGCCCATACTGGTGGGTCCACGAGACCCCTTACTACAGCAACACCTCCATGCCACACATCGAGCAGTTTCCCATGACCTGTGAGACGGGACCAGGGAGTCCATCTGGGCATGCAATGGGAGCTGCTGGAGTCTATTACGCCATGGTGACGTCTATCCTCGCCATCCTGCTGAGCAACAAGAAGACCCTATCCTCCTCAGCCATgTACTTGCGAGGCAGCCTGTGGGCGCTGTTCTGGACTGTCCAGATTTGCGTGTGTCTGTCCAGGGTCTTCATTGCAGCCCACTTCCCTCATCAGGTCATTGCTGGTGTTATTACAGGTATGATCGTGGCTGAAGTCTTCAACAGACAGAAGTGGATCTACCAGGCCAGTCTGCAGAAATACTTCAACATCACTCTGTTCTTGCTCTCGTTCGCTGTGGGCTTGTACGTCCTCCTCAAAGCGATGGGCGTGGACCTCCTCTGGACTCTGGAAAAGGCCCAAAAATGGTGTGTCAACCCAGCTTGGGTCCACCTGGACACCACGCCCTTCGCCAGCCTGCTGCGCAACATGGGCACCCTCTTCGGCCTGGGCTTGGGGCTCCACTCCCCGCTCTACACTGAAAGCAAAAGGAGCGGTAGCGCCCCCTTCAGGATCGGCTGCATAGTGAGCACGCTGTTCCTGCTGCACCTCTTCGACTCCATCAAACCGCCAACCCACACAGCCGCCCTCTTTTACCTGCTCTCTTTCTGCAAGAGCGCCACCGTTCCCCTGGTTACCGTCAGCATCATTCCCTACTGCTTATCTGGAGCCATGAGCTTACAGAGCAAAAAGCAGCTCTAAAGGTTTAAGAGGACTTGTGGAGGATGCTGGGTTTCCCAGACCTCGCTCTGCAGGGCTAACCATGCACATTTACTTGCCTGCACATTTTGATGCTTTCCCTGCTTCGAACACACAGGAAAAACACCAGAATGTGCAGGCAGCAAGTGGACTCCAGGAGCAGAACTGGAAACCACAGGACATGATCACAAACTATTAGCAGTATTTCCAGGTGCTTCAAtctttaaatacatatatttttaaaactcacTGTCAAACGAAAACTTGTGTCCAACAACAAATTCCATGTATTCTGTAAGTATTCTATTCCGTGCACTTGGATTTAACACAAGAGGCTTTATTTCCAATCCTGATAGAAGCAgagcctgtaaaaaaaaaaaaaaaaaaaagtcgttTATTGCTCAGGACaatgaaatattgtgtttagatgactgttttatttaatctcaTAACTTATGTCTTAGTGCCCTTAGACCGTGTGCTGAGAATAGGCTTGGCGTCGAGCCCAAGTatacaaatgtttttattttagaggaGGTTCGTTTTTGCGGACTGATAGATATATTTAGTTAAGAAAGTTTTAGTTAAAAAAGGTGAGAAACAGtattttcagcaaaaaaaaaattaaagaaaa

Function

symbol description
g6pc Enables glucose-6-phosphatase activity and phosphotransferase activity, alcohol group as acceptor. Acts upstream of or within several processes, including cholesterol homeostasis; glucose-6-phosphate transport; and glycogen catabolic process. Located in endoplasmic reticulum. Is expressed in liver; metanephros; and small intestine. Used to study glycogen storage disease I. Human ortholog(s) of this gene implicated in hepatocellular carcinoma and type 2 diabetes mellitus. Orthologous to human G6PC1 (glucose-6-phosphatase catalytic subunit 1).

NR:

description
glucose-6-phosphatase

GO:

id name namespace
GO:0016020 membrane cellular_component
GO:0004346 glucose-6-phosphatase activity molecular_function

KEGG:

id description
K01084 G6PC; glucose-6-phosphatase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007233994.3 True 1769 mRNA 0.48 5 21873312 21878213

Neighbor

gene id symbol gene type direction distance location
ptges3l ptges3l,si:ch211-131k2.3,LOC107653952 coding upstream 22331 21843965 ~ 21850981 (+)
LOC111192390 NA coding upstream 45185 21824379 ~ 21828127 (+)
dlx3 dlx3,dlx3b,LOC107739764,LOC107557343,LOC107653950,LOC107598678,LOC107708903 coding upstream 244136 21625601 ~ 21629176 (+)
ace ace,LOC107653924,LOC107664635 coding upstream 399194 21430472 ~ 21474118 (+)
LOC103044640 NA coding upstream 520420 21352191 ~ 21352892 (+)
sgms1 sgms1 coding downstream 60416 21938629 ~ 21950677 (+)
LOC103023313 NA coding downstream 81234 21959447 ~ 21984284 (+)
LOC103021762 asah2,LOC107598643 coding downstream 109591 21987804 ~ 22011805 (+)
LOC111192422 NA coding downstream 192034 22070247 ~ 22097898 (+)
prkg1 prkg1,prkg1b,LOC107695529,LOC106589397 coding downstream 219538 22097751 ~ 22350082 (+)
G38310 LOC108443262,LOC108274343,LOC107695523,LOC107708934,LOC107654044,LOC107598610 non-coding upstream 1776 21870422 ~ 21871536 (+)
G38306 kat7,LOC108443263,LOC107695506,LOC107557320,LOC106579267 non-coding upstream 32034 21828150 ~ 21841278 (+)
G38301 NA non-coding upstream 94219 21778658 ~ 21779093 (+)
G38169 NA non-coding upstream 179547 21686883 ~ 21693765 (+)
G38152 NA non-coding upstream 252752 21574862 ~ 21620560 (+)
G38314 NA non-coding downstream 3223 21881436 ~ 21882906 (+)
G38324 NA non-coding downstream 30848 21909061 ~ 21937073 (+)
G38325 NA non-coding downstream 56068 21934281 ~ 22013053 (+)
G38330 a1cf non-coding downstream 135286 22013499 ~ 22016473 (+)
G38375 NA non-coding downstream 175146 22053359 ~ 22053669 (+)
plce1 plce1,LOC107743958 other upstream 576489 21166568 ~ 21296823 (+)
lgi1 lgi1,lgi1b,LOC107743957,LOC107664615,LOC107598600,LOC107654035,LOC107708938 other upstream 744548 21109080 ~ 21128764 (+)
G38079 kif22,LOC107664627 other upstream 842515 21019169 ~ 21030797 (+)
G37943 NA other upstream 1714973 20155728 ~ 20158339 (+)
LOC103039215 ubtd1b,ubtd1,LOC108437310,LOC107720068 other upstream 2361871 19488899 ~ 19511441 (+)
trnar-ccu_1 NA other downstream 1869256 23747469 ~ 23747541 (+)
trnar-ccu_2 NA other downstream 1869358 23747571 ~ 23747643 (+)
trnar-ccu_3 NA other downstream 1869460 23747673 ~ 23747745 (+)
trnar-ccu_4 NA other downstream 1869562 23747775 ~ 23747847 (+)
trnar-ccu_5 NA other downstream 1869664 23747877 ~ 23747949 (+)

Expression


Co-expression Network