Gene
RNA
| Item | Value |
|---|---|
| gene id | G52913 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000009 |
| NCBI id | null |
| chromosome length | 16003125 |
| location | 4350617 ~ 4351298 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU60269 | True | 682 | lncRNA | 0.40 | 1 | 4350617 | 4351298 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000009_04261520_04263271 | NA | coding | upstream | 87192 | 4261116 ~ 4263425 (+) |
| CI01000009_04218049_04229604 | ATP1A1A.4, ATP1A1B, ATP1A1, ATP1A1A.1 | coding | upstream | 120827 | 4218049 ~ 4229790 (+) |
| CI01000009_04199761_04203673 | MAB21L3 | coding | upstream | 146722 | 4199379 ~ 4203895 (+) |
| CI01000009_04193380_04194878 | NA | coding | upstream | 155715 | 4193380 ~ 4194902 (+) |
| CI01000009_04188754_04191658 | RCAN1, RCAN1A | coding | upstream | 157647 | 4188141 ~ 4192970 (+) |
| CI01000009_04435947_04448679 | NA | coding | downstream | 83401 | 4434699 ~ 4448727 (+) |
| CI01000009_04462240_04659526 | LRP1BA, LRP1B | coding | downstream | 110942 | 4462240 ~ 4660735 (+) |
| CI01000009_04758013_04761749 | NA | coding | downstream | 405053 | 4756351 ~ 4761839 (+) |
| CI01000009_04763889_04769573 | INHBB | coding | downstream | 412022 | 4763320 ~ 4769829 (+) |
| CI01000009_04866883_04867968 | NA | coding | downstream | 515453 | 4866751 ~ 4873730 (+) |
| G52911 | NA | non-coding | upstream | 10873 | 4335838 ~ 4339744 (+) |
| G52909 | NA | non-coding | upstream | 26736 | 4323635 ~ 4323881 (+) |
| G52908 | NA | non-coding | upstream | 28843 | 4321448 ~ 4321774 (+) |
| G52905 | NA | non-coding | upstream | 33644 | 4316743 ~ 4316973 (+) |
| G52877 | NA | non-coding | upstream | 68808 | 4281362 ~ 4281809 (+) |
| G52887 | NA | non-coding | downstream | 34420 | 4385718 ~ 4389755 (+) |
| G52931 | NA | non-coding | downstream | 333543 | 4684841 ~ 4685130 (+) |
| G52935 | NA | non-coding | downstream | 340572 | 4691870 ~ 4692324 (+) |
| G52937 | NA | non-coding | downstream | 342756 | 4694054 ~ 4694511 (+) |
| G52938 | NA | non-coding | downstream | 343236 | 4694534 ~ 4695274 (+) |
| CI01000009_03202999_03207060 | MPC2, MPC2.S | other | upstream | 1141633 | 3202207 ~ 3208984 (+) |
| G51529 | NA | other | upstream | 1288030 | 3062033 ~ 3062587 (+) |
| G51274 | NA | other | upstream | 2000131 | 2255099 ~ 2350486 (+) |
| CI01000009_01897343_01919208 | PIKFYVE | other | upstream | 2449191 | 1897343 ~ 1919516 (+) |
| G51122 | NA | other | upstream | 2668651 | 1680146 ~ 1681966 (+) |
| G53388 | NA | other | downstream | 1170944 | 5522242 ~ 5540638 (+) |
| CI01000009_05931829_05943829 | KCNH3 | other | downstream | 1509004 | 5931718 ~ 5943899 (+) |
| G53651 | NA | other | downstream | 1894266 | 6245564 ~ 6248392 (+) |
| G56100 | NA | other | downstream | 4778002 | 9129300 ~ 9130286 (+) |
| CI01000009_09853929_09854476 | SAP18 | other | downstream | 5502061 | 9853929 ~ 9856587 (+) |
