Gene
RNA
| Item | Value |
|---|---|
| gene id | G55385 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000009 |
| NCBI id | null |
| chromosome length | 16003125 |
| location | 7764193 ~ 7764434 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU62998 | True | 242 | lncRNA | 0.48 | 1 | 7764193 | 7764434 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000009_07555667_07623149 | DNAH7 | coding | upstream | 140275 | 7555667 ~ 7623918 (+) |
| CI01000009_07545007_07550103 | NA | coding | upstream | 213464 | 7545007 ~ 7550729 (+) |
| CI01000009_07543034_07544161 | NA | coding | upstream | 220032 | 7543034 ~ 7544161 (+) |
| CI01000009_07490344_07493862 | ESTD, ESD | coding | upstream | 270331 | 7490248 ~ 7493862 (+) |
| CI01000009_07440170_07459782 | HTR2A, HTR2AA | coding | upstream | 303784 | 7440039 ~ 7460409 (+) |
| CI01000009_07969738_07973990 | NA | coding | downstream | 204710 | 7969144 ~ 7974033 (+) |
| CI01000009_07982462_07999759 | NA | coding | downstream | 217816 | 7982250 ~ 8000306 (+) |
| CI01000009_08002011_08021062 | TMEFF2 | coding | downstream | 237342 | 8001776 ~ 8021113 (+) |
| CI01000009_08027345_08040961 | NA | coding | downstream | 261492 | 8025926 ~ 8040984 (+) |
| CI01000009_08045921_08048630 | NABP1A | coding | downstream | 281085 | 8045519 ~ 8049154 (+) |
| G55328 | NA | non-coding | upstream | 39381 | 7724576 ~ 7724812 (+) |
| G55091 | NA | non-coding | upstream | 110843 | 7652919 ~ 7653350 (+) |
| G55058 | NA | non-coding | upstream | 202376 | 7561549 ~ 7561817 (+) |
| G55057 | NA | non-coding | upstream | 212072 | 7551872 ~ 7552121 (+) |
| G55032 | NA | non-coding | upstream | 277163 | 7486813 ~ 7487030 (+) |
| G55395 | NA | non-coding | downstream | 11015 | 7775449 ~ 7775651 (+) |
| G55415 | NA | non-coding | downstream | 28894 | 7793328 ~ 7793616 (+) |
| G55417 | NA | non-coding | downstream | 31602 | 7796036 ~ 7796266 (+) |
| G55453 | NA | non-coding | downstream | 93525 | 7857959 ~ 7865817 (+) |
| G55476 | NA | non-coding | downstream | 128412 | 7892846 ~ 7893045 (+) |
| G53651 | NA | other | upstream | 1515801 | 6245564 ~ 6248392 (+) |
| CI01000009_05931829_05943829 | KCNH3 | other | upstream | 1831392 | 5931718 ~ 5943899 (+) |
| G53388 | NA | other | upstream | 2225139 | 5522242 ~ 5540638 (+) |
| CI01000009_03202999_03207060 | MPC2, MPC2.S | other | upstream | 4555209 | 3202207 ~ 3208984 (+) |
| G51529 | NA | other | upstream | 4701606 | 3062033 ~ 3062587 (+) |
| G56100 | NA | other | downstream | 1364866 | 9129300 ~ 9130286 (+) |
| CI01000009_09853929_09854476 | SAP18 | other | downstream | 2088925 | 9853929 ~ 9856587 (+) |
| CI01000009_11761868_11765848 | ORMDL1.S, ORMDL1 | other | downstream | 3996352 | 11761606 ~ 11766944 (+) |
| G57811 | NA | other | downstream | 4169508 | 11933942 ~ 11935251 (+) |
| CI01000009_12432736_12435509 | NA | other | downstream | 4668124 | 12432538 ~ 12436017 (+) |
