G16465


Basic Information

Item Value
gene id G16465
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035899.1
NCBI id CM008302.1
chromosome length 74127438
location 4745399 ~ 4745685 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU22269
GCGCTCTTTGCACAACTACTTCCGCATTCTCATCAGTGCTGCTCGAGCGTTTCCTGTTTGGATTTTCTAATACACTCGCTATGGCAGTATTTTCAGCTGGTGTTTACAAGAGCTTCTAAAAATTAACCTCAACGTCGAGGAGACCAGTAAAGCCTACCACTAGAAAGCTAGAGAAAGGCTTTAAACTATATGCATCTTCATACCTACACAACtacgaagattttttttcttatattttacgtTAGCCCACACAACTCAGCATTAGCTagtatagctaactagcttgc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU22269 True 287 lncRNA 0.41 1 4745399 4745685

Neighbor

gene id symbol gene type direction distance location
LOC103036617 rcbtb2 coding upstream 9746 4720423 ~ 4735653 (+)
LOC111191780 NA coding upstream 623324 4120484 ~ 4122075 (+)
LOC103022138 LOC108428416,LOC108260357,LOC107714896,LOC107691814,LOC107572424 coding upstream 657939 3998429 ~ 4087460 (+)
tmem248 tmem248 coding upstream 757960 3976558 ~ 3987439 (+)
lig3 lig3,LOC107691772,LOC107710722,LOC107689374 coding upstream 776174 3950349 ~ 3969225 (+)
LOC103034847 LOC108426960 coding downstream 4768 4750453 ~ 4753398 (+)
cog6 cog6,LOC107699813,LOC107670561 coding downstream 216229 4961914 ~ 5030716 (+)
LOC103032405 slc25a15,slc25a15a,LOC107561472,LOC107670691,LOC107593465 coding downstream 440812 5186497 ~ 5195523 (+)
LOC103032089 stoml3,LOC102781741,LOC105011208,LOC108236983 coding downstream 453006 5198691 ~ 5208963 (+)
znf804b NA coding downstream 695009 5440694 ~ 5664643 (+)
G16439 LOC108426957,LOC107740387,LOC107593468 non-coding upstream 139406 4603567 ~ 4605993 (+)
G16431 NA non-coding upstream 185365 4557270 ~ 4560034 (+)
G16430 NA non-coding upstream 189848 4555315 ~ 4555551 (+)
G16414 LOC107833664 non-coding upstream 210163 4534971 ~ 4535236 (+)
G16410 NA non-coding upstream 219070 4524728 ~ 4526329 (+)
G16466 NA non-coding downstream 432 4746117 ~ 4747513 (+)
G16530 NA non-coding downstream 377882 5123567 ~ 5129032 (+)
G16633 NA non-coding downstream 519016 5264701 ~ 5264995 (+)
G16643 NA non-coding downstream 570081 5315766 ~ 5315971 (+)
G16648 NA non-coding downstream 598415 5344100 ~ 5345911 (+)
LOC103038305 NA other upstream 228090 4515997 ~ 4517309 (+)
nrgn NA other upstream 2574192 2150630 ~ 2171207 (+)
G15839 NA other upstream 3063377 1681159 ~ 1682022 (+)
fdxacb1 fdxacb1 other upstream 3215982 1516497 ~ 1529417 (+)
LOC103025578 NA other upstream 3404599 1322516 ~ 1340800 (+)
LOC103025913 NA other downstream 1423075 6168760 ~ 6177884 (+)
G16820 NA other downstream 1786711 6532396 ~ 6532868 (+)
LOC103032995 NA other downstream 2676886 7422571 ~ 7429391 (+)
LOC103041197 NA other downstream 3423154 8168839 ~ 8184837 (+)
G17414 NA other downstream 3929934 8675619 ~ 8716787 (+)

Expression


Co-expression Network