G29702


Basic Information

Item Value
gene id G29702
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035899.1
NCBI id CM008302.1
chromosome length 74127438
location 60395649 ~ 60396246 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU39815
TCGGCTACCGCTAGCGGAGTCCCGGAGCTCTTCAGCGGGACACGGCTACAGCTAGAGCTAGAGACACAGCTATAAACACACACGGCCGCGGGGGTAACGAGAgcaggagctactgaacacagtGATTAATGAACACATAGAGCAGCCCGCTGTTAGTTAGTTAACGCTAGGTTCGCTAACTAGCTTAACTAGTAGAGTAAACACAAACTTAGCCTCTCAGCCAAATGACCTGTAGATGCAGTTTCCATGACAACAGGGAGCGGCTGGCGCGCGCTCGCGGACTCGCTCCGATCGTCCTCCGGCTCCCCTGAGCGGGCCGCGGCGCCGCCGAACCCGGCCGTCCTCTCGAAGCCGTCTCCGTACCAGCCGTCCTCTGAAGCGGGCTCCTCGCTGGGCTTGGCGGACATGCTGGTCTCGCGGGCTCGTCAGCGCGTGCTGTGTCTCGCACCGACCGGAGGCTCGTTAATCTGAACCGGAGAGCGGAGCAGTGAGGGCACGGGACCGGCTGAGCTCAGAGGACGAGCCGCGGCGTGTCGCAggtctctctcagtgtgtgtgtgtgtgtgtagcttctCCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU39815 True 577 lncRNA 0.39 2 60395649 60396246

Neighbor

gene id symbol gene type direction distance location
LOC103035477 six6b,six6,LOC103035477,LOC108434975,LOC107697293,LOC107589092,LOC107743981,LOC107701490 coding downstream 84003 60307935 ~ 60311646 (-)
LOC103034514 LOC108434990,LOC108258108 coding downstream 176593 60184694 ~ 60219056 (-)
LOC103033873 hif1a,LOC107589062,LOC107743977,LOC107563689 coding downstream 218295 60163340 ~ 60177354 (-)
LOC103033561 NA coding downstream 249729 60128047 ~ 60145920 (-)
LOC103032801 ppp2r5ea,LOC103032801,LOC108434994,LOC108257929,LOC107697307,LOC107701493,LOC107707079,LOC107743972,LOC107563687 coding downstream 272171 60097488 ~ 60123478 (-)
LOC103027016 LOC104934434,LOC108434982,LOC103370010 coding upstream 206164 60602410 ~ 60607157 (-)
xrcc3 xrcc3 coding upstream 301040 60697286 ~ 60702253 (-)
btbd6 btbd6,btbd6b,LOC107755235,LOC107718408,LOC107589075,LOC107701487,LOC107560384 coding upstream 334956 60731202 ~ 60735851 (-)
LOC103028984 LOC108412120 coding upstream 773256 61169502 ~ 61201223 (-)
nudt14 nudt14,LOC107683965,LOC107755236,LOC107718404,LOC107701483 coding upstream 973749 61369995 ~ 61430279 (-)
G29684 NA non-coding downstream 7288 60387980 ~ 60388361 (-)
G29681 NA non-coding downstream 11187 60384003 ~ 60384462 (-)
G29608 NA non-coding downstream 303890 60074072 ~ 60091759 (-)
G29563 NA non-coding downstream 537310 59858066 ~ 59858339 (-)
G29559 NA non-coding downstream 543181 59852055 ~ 59852468 (-)
G29707 NA non-coding upstream 64742 60460988 ~ 60463346 (-)
G29716 NA non-coding upstream 67730 60463976 ~ 60519797 (-)
G29724 NA non-coding upstream 101965 60498211 ~ 60501192 (-)
G29741 NA non-coding upstream 123994 60520240 ~ 60525384 (-)
G29803 NA non-coding upstream 396530 60792776 ~ 60793791 (-)
LOC111191938 NA other downstream 26035 60369046 ~ 60369614 (-)
LOC103035785 ppm1a,LOC108434987,LOC108258036 other downstream 30905 60351272 ~ 60364744 (-)
LOC103034188 LOC108434976 other downstream 233583 60149397 ~ 60162066 (-)
snx17 snx17 other downstream 842739 59506926 ~ 59552910 (-)
G29478 NA other downstream 957351 59437600 ~ 59438298 (-)
LOC103029720 jag2,jag2b,LOC107718403,LOC107755239 other upstream 896630 61292876 ~ 61364878 (-)
LOC103043586 mark3b,LOC108412004,LOC107697167,LOC108258043 other upstream 1435595 61831841 ~ 61890729 (-)
fryl fryl,LOC107683942,LOC107665346 other upstream 2740705 63136951 ~ 63288108 (-)
G30376 NA other upstream 2933798 63330044 ~ 63334846 (-)
usp46 usp46 other upstream 3037546 63433792 ~ 63485021 (-)

Expression


Co-expression Network