LOC103030846 (LOC108426561,LOC103358366,LOC104935909)


Basic Information

Item Value
gene id LOC103030846
gene name LOC108426561,LOC103358366,LOC104935909
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035899.1
NCBI id CM008302.1
chromosome length 74127438
location 8873882 ~ 8877125 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_022680048.1
GGATGTAAGCCTCCCCTCACCACAGTTCACTCCATACccatcacacactctcacacacacagagcagagagagacTGCTGGACCTCAGAGCGGCTGAACTGTCGAGCAGTAAAGAGACCAAAGATGCAGTCTGTAGTTAAACACAACCTCCATTCAGAGAGTGAGGGAGCCATTAATAAGCTCATCAACATCAAGCTCACAGCGTCCTACACCTACTTGTCTTTGGGCATGTATTTTGACCGAGACGATGTGGCTCTGCCCAACTTCTCCAAATATTTTCTGGAGCGCTCTGTGAAGGAGAGGGAGCATGCTGAGCATTTGCTGGGGTATCAAAACATGAGAGGTGGAAGAGTTCTTCTTCAGACTATTGCGGTGAGTGTGGGTCCCGGTTTAAAGTCTTTTCTTCTGTGCAGGATCTTCTGCTTTGTCTTTATTATGTTGCCAGCCCAGTGTTTCTCATTGCTCCAGTAATATTCCtatttacac

Function

NR:

description
PREDICTED: ferritin, lower subunit-like

GO:

id name namespace
GO:0006879 cellular iron ion homeostasis biological_process
GO:0006826 iron ion transport biological_process
GO:0008199 ferric iron binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_022680048.1 True 486 mRNA 0.47 3 8873882 8877125

Neighbor

gene id symbol gene type direction distance location
LOC103029888 LOC103029888,LOC108426543,LOC107664666,LOC107550022,LOC107742254,LOC100704658 coding downstream 41961 8813024 ~ 8831921 (-)
LOC103028623 LOC108426558,LOC108256678,LOC107655803,LOC107755711,LOC107557242,LOC105028465,LOC107550020,LOC107664669,LOC107742255 coding downstream 97635 8746885 ~ 8776247 (-)
LOC103037764 laptm4b,LOC103037764,LOC108414450,LOC106579220,LOC106605533 coding downstream 217008 8645276 ~ 8656874 (-)
matn2 NA coding downstream 229450 8630223 ~ 8644432 (-)
LOC103038077 NA coding downstream 249739 8610142 ~ 8624143 (-)
LOC103047134 LOC103047134 coding upstream 98333 8975458 ~ 8979618 (-)
txndc5 txndc5,LOC107730007 coding upstream 194257 9071382 ~ 9084286 (-)
bloc1s5 bloc1s5 coding upstream 231889 9109014 ~ 9113905 (-)
gcm2 gcm2,LOC107552658,LOC107664656,LOC107707735,LOC107654664 coding upstream 1193953 10071078 ~ 10078582 (-)
elovl2 elovl2,LOC101268971 coding upstream 1226054 10103179 ~ 10118608 (-)
G17536 NA non-coding downstream 62403 8793865 ~ 8811479 (-)
G17532 NA non-coding downstream 85595 8746380 ~ 8788287 (-)
G17514 NA non-coding downstream 200705 8668990 ~ 8673177 (-)
G17326 hus1 non-coding downstream 714497 8148967 ~ 8159385 (-)
G17313 NA non-coding downstream 817593 8056033 ~ 8056289 (-)
G17558 NA non-coding upstream 34845 8911970 ~ 8960840 (-)
G17585 NA non-coding upstream 107236 8984361 ~ 8985654 (-)
G17589 NA non-coding upstream 120975 8998100 ~ 9442767 (-)
G17600 NA non-coding upstream 190910 9068035 ~ 9157978 (-)
G17599 NA non-coding upstream 227439 9104564 ~ 9108428 (-)
LOC103026934 ahrr,LOC108431062 other downstream 866262 7924929 ~ 8007620 (-)
sec61b sec61b,LOC102796100 other downstream 2329607 6534859 ~ 6544275 (-)
LOC111191940 NA other downstream 2510877 6354945 ~ 6363005 (-)
LOC103024654 NA other downstream 2763599 6105816 ~ 6110283 (-)
glipr2 glipr2,glipr2l,LOC107706057,LOC107689891 other downstream 2773538 6083120 ~ 6100344 (-)
G17638 NA other upstream 685302 9562427 ~ 9562725 (-)
mak mak other upstream 1118020 9995145 ~ 10009151 (-)
G17792 NA other upstream 1369550 10246675 ~ 10247318 (-)
LOC103047439 zswim7,LOC107665024,LOC107712139,LOC107740465,LOC107688637,LOC107731017 other upstream 2138904 11016029 ~ 11080184 (-)
LOC107197924 NA other upstream 2199113 11076238 ~ 11083799 (-)

Expression


Co-expression Network