CI01000010_00912846_00919998


Basic Information

Item Value
gene id CI01000010_00912846_00919998
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000010
NCBI id null
chromosome length 12265998
location 912846 ~ 920227 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000010_00912846_00919998.mRNA
TACAGAACCGGTGTTCAGTTCCCGGTTTTTACTCAGTTGGATTTAATGGCTGCTGAGCAAGAAACGGATCATTCCAACCCACCTGTGGACTTGGTGAAAACACCTTTCATAAACGTGTGCCACACGTCCGGGTTAAAGTTAACCCAAATCAACGACAAGACAACAACATTATGGCCAAGGCCACTGGCTCAGATATGGACCCTGATGCTGCTGTTGGTCACATGTTTTCTCTACTGGTCACGGATGGCCATGCCAATCTGTGCCGTCACCATGGCAAAAGAATTTGGATGGAGCAAGACTGAGACTGGCATGGTGCTGGGTGCTTATTTCTGGGGTTACTGTTTTACTCAGGTCCTTGGTGGCCATGCCAGTGATAGGATAGGAGGAGAGAGAGTACTGCTGCTGTCCACCCCCTCCTGGGCTGTGATGACAGCTATCACACCGCTTCTGGCCAACATTGGTCTCCAACCTCTTGTTACCATGACAGTGACCAGGTTTTTACTGGGTGCAATGCAAGGGGTTCACTACCCTTCTCTCGTCAGTGTCTGTGCTCAGCGTGTGACGGAGGGAGAGAGAGGTTTTTCAATGAGCACTCTGGCATGTGGGTGCTACCTAGGGATGACACTGGTTGGAGGTGTGGGTTCCCTGATGCTGGACTGGTTTGGATGGGAAAGTGTGTTTTATGGAGCTGGTTTCCTTGCTATTTGCTGGACCTTTTGTGTATGGAAATGTCTTCACCAAGGTCCAGTTTTCTCCCTTGACTCACTGCGGATCAGCAACAATTGCGTGCCTGAATCCATTAGAATCAACTGGCTGTATCTCCTCAAAGAGCCTAGTGTCTGGGCCATGATCATTTCTCATCTATGCTTTAGTAGCACCTATTACAACCTCATGTCATGGCTACCAACATTTTTCAAAGAAAAGTTTCCTCATGCCAAGGATTGGGTGTTTAATGTGATTCCTTGGTTTGTGGCGCTGCCCACTTCACTGTTTGGAGGCTCTATCTCTGATCATCTCATTAGGCAAGGCTGTGGGACAGCAACTGTAAGAAAACTGATGCAGTTCTGTGCTATGGGAGCAGCCAGTGTGTTCATCATCCTTCTCTGGGTTATGAACACATGTGCTGCTTTTACTGGTTTGCTGATGGTGTACATGTCTGGCTACATCATTGAGATCACGGGATCCTGGGAAACTGTGTTCTCCATCCTGGCTGTGGTGAACATCATTGGTGTCACCGTATTCATTGTGCTGGGTGATGCAAAGCGAGTTGATCAGCCTCAGATCATTTGAACATCATGTTGAAAACAAATTCTACCTCTCCAAGGCATATTGGGGTTTCCTTATTTGTCATTTGTAACAAATGGATTGGAAACTCTTCAACACTCTAAAACACTGTACAATAACTTTGTCATTATTTATTTTTTTAAATGTATATTAAATATTTGGCAGAGATGGAATTGGAAATGATACAGTGAAACAATGTTTTATATAACAAATATTTATCTGAATAGTAACTTTA

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000010_00912846_00919998.mRNA True 1519 mRNA 0.45 12 912846 920227

Neighbor

gene id symbol gene type direction distance location
CI01000010_00910595_00911893 MGC83062, GID8, GID8.L, CT011, GID8A, GID8B coding upstream 900 910595 ~ 911946 (+)
CI01000010_00907286_00907804 NA coding upstream 4965 907062 ~ 907881 (+)
CI01000010_00892258_00898466 YTHDF1 coding upstream 14292 892258 ~ 898554 (+)
CI01000010_00886120_00889930 NA coding upstream 22887 885891 ~ 889959 (+)
CI01000010_00881905_00883563 NA coding upstream 29162 881195 ~ 883684 (+)
CI01000010_00924389_00928340 DNAJC5 coding downstream 3734 923961 ~ 928351 (+)
CI01000010_00934527_00937510 NA coding downstream 14300 934527 ~ 937976 (+)
CI01000010_00944226_00945123 NA coding downstream 23999 944226 ~ 945178 (+)
CI01000010_00946586_00947327 NA coding downstream 25036 945182 ~ 947577 (+)
CI01000010_01029244_01041878 DNMT3BA coding downstream 108622 1028849 ~ 1042357 (+)
G60817 NA non-coding upstream 123420 788888 ~ 789426 (+)
G60801 NA non-coding upstream 176837 727837 ~ 736009 (+)
G60780 NA non-coding upstream 234739 673066 ~ 678107 (+)
G60693 NA non-coding upstream 315751 596824 ~ 597095 (+)
G60745 NA non-coding upstream 344914 567603 ~ 567932 (+)
G60852 NA non-coding downstream 28630 948857 ~ 959047 (+)
G60915 NA non-coding downstream 98790 1019017 ~ 1019485 (+)
G61218 NA non-coding downstream 330018 1250245 ~ 1250446 (+)
G61220 NA non-coding downstream 332109 1252336 ~ 1252899 (+)
G61219 NA non-coding downstream 332841 1253068 ~ 1253739 (+)
CI01000010_00826648_00831638 NA other upstream 74414 826648 ~ 832705 (+)
CI01000010_03197380_03199958 NA other downstream 2273928 3197380 ~ 3200044 (+)
CI01000010_03320340_03346243 NA other downstream 2393468 3313695 ~ 3347796 (+)
G62838 NA other downstream 2969868 3890095 ~ 3893793 (+)
G62856 NA other downstream 3017530 3937757 ~ 3939945 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location