CI01000010_00910595_00911893 (MGC83062, GID8, GID8.L, CT011, GID8A, GID8B)


Basic Information

Item Value
gene id CI01000010_00910595_00911893
gene name MGC83062, GID8, GID8.L, CT011, GID8A, GID8B
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000010
NCBI id null
chromosome length 12265998
location 910595 ~ 911946 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000010_00910595_00911893.mRNA
CACATCCATGATGAGTTATTCAGAAAAGCCTGAGGATATTACAAAGGAGGAATGGATGGATAAACTGAATAATGTGCACATTCAGAGGGCGGATATGAACAGGCTTATCATGAACTATCTAGTAACAGAGGGATTTAAAGAGGCTGCAGAGAAGTTCCGTATGGAATCCGGGATTGAACCGAACGTGGATCTGGACTCTCTTGACGAGAGGATAAAGATCAGGGAAATGGTTCTGAAAGGTCAGATCCAGGAAGCCATTGCTCTAATTAACAGCCTTCACCCCGAGCTCCTTGACACCAATCGATACCTCTACTTTCACCTTCAGCAGCAGCATCTGATTGAGCTCATCCGTTTGCGGGAAACTGAGGCAGCGCTGGAGTTTGCGCAGTCACAGCTGGCCGAACAGGGAGAGGAGAGCAGAGAATGTCTTACTGAGATGGAGCGGACCCTAGCACTGCTCGCCTTCGACAACCCAGAAGAATCGCCGTTTGGAGACCTGCTCAACATGATGCAGAGGCAGAAGGTGTGGAGCGAGGTGAACCAGGCTGTTCTAGACTATGAGAACAGGGAATCTACTCCAAAATTAGCAAAGCTGCTGAAACTTTTACTGTGGGCTCAGAATGAACTGGACCAGAAAAAAGTGAAATACTCCAGAATGACAGACCTTAGCAAGGGCACCATTGAGGACCCCAAGTAGAGACTGTAATACACATGGACACGTTTGAATTTATTTTTTTTTTTGTCCTATTT

Function

symbol description
gid8b Involved in positive regulation of canonical Wnt signaling pathway. Acts upstream of or within determination of dorsal identity. Predicted to be active in cytoplasm and nucleus. Is expressed in several structures, including endoderm; hatching gland; mesoderm; notochord; and tail bud. Orthologous to human GID8 (GID complex subunit 8 homolog).
gid8a Involved in positive regulation of canonical Wnt signaling pathway. Acts upstream of or within determination of dorsal identity. Predicted to be active in cytoplasm and nucleus. Orthologous to human GID8 (GID complex subunit 8 homolog).
gid8 Predicted to enable protein homodimerization activity. Involved in positive regulation of canonical Wnt signaling pathway and positive regulation of cell population proliferation. Located in cell junction; cytosol; and nucleoplasm. Part of ubiquitin ligase complex.

GO:

id name namespace
GO:0005654 nucleoplasm cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000010_00910595_00911893.mRNA True 750 mRNA 0.47 4 910595 911946

Neighbor

gene id symbol gene type direction distance location
CI01000010_00907286_00907804 NA coding upstream 2714 907062 ~ 907881 (+)
CI01000010_00892258_00898466 YTHDF1 coding upstream 12041 892258 ~ 898554 (+)
CI01000010_00886120_00889930 NA coding upstream 20636 885891 ~ 889959 (+)
CI01000010_00881905_00883563 NA coding upstream 26911 881195 ~ 883684 (+)
CI01000010_00841791_00854049 UCKL1A, UCKL1B, UCKL1 coding upstream 56356 841791 ~ 854239 (+)
CI01000010_00912846_00919998 NA coding downstream 900 912846 ~ 920227 (+)
CI01000010_00924389_00928340 DNAJC5 coding downstream 12015 923961 ~ 928351 (+)
CI01000010_00934527_00937510 NA coding downstream 22581 934527 ~ 937976 (+)
CI01000010_00944226_00945123 NA coding downstream 32280 944226 ~ 945178 (+)
CI01000010_00946586_00947327 NA coding downstream 33317 945182 ~ 947577 (+)
G60817 NA non-coding upstream 121169 788888 ~ 789426 (+)
G60801 NA non-coding upstream 174586 727837 ~ 736009 (+)
G60780 NA non-coding upstream 232488 673066 ~ 678107 (+)
G60693 NA non-coding upstream 313500 596824 ~ 597095 (+)
G60745 NA non-coding upstream 342663 567603 ~ 567932 (+)
G60852 NA non-coding downstream 36911 948857 ~ 959047 (+)
G60915 NA non-coding downstream 107071 1019017 ~ 1019485 (+)
G61218 NA non-coding downstream 338299 1250245 ~ 1250446 (+)
G61220 NA non-coding downstream 340390 1252336 ~ 1252899 (+)
G61219 NA non-coding downstream 341122 1253068 ~ 1253739 (+)
CI01000010_00826648_00831638 NA other upstream 72163 826648 ~ 832705 (+)
CI01000010_03197380_03199958 NA other downstream 2282209 3197380 ~ 3200044 (+)
CI01000010_03320340_03346243 NA other downstream 2401749 3313695 ~ 3347796 (+)
G62838 NA other downstream 2978149 3890095 ~ 3893793 (+)
G62856 NA other downstream 3025811 3937757 ~ 3939945 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location