CI01000010_00964665_01011716 (NOL4L, NOL4LA)


Basic Information

Item Value
gene id CI01000010_00964665_01011716
gene name NOL4L, NOL4LA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000010
NCBI id null
chromosome length 12265998
location 964310 ~ 1011716 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000010_00964665_01011716.mRNA
GATTCTCACGCCCGTATGACATCAACAGGCTTGTGTCATATCCCGTATTAGAACGCTCGCGCCGGTCGTTTAGAAAGTGGGCCGTTAAAGTCTGTCACCGCGAGCTCTTTTTATCCCTTCCTGGAGCCAGGAAGGTTTGCGTGTTTTTTACGTTTACTGTATCGACCCTCGGGGTTTTTCCCACTTACACTGGTCCTCGAGCTGTTTACGCACAGGGGCACGCGGCTCACAAAGAGGAAGGAATGGCAACTAAGAAACCATGCGCGGATTTAACAAAAAGGAGCCGAAGTCCCGTCGTGCTGGAGGCAGAGATGTTCAGCGAATTTCAGGACTGGTGTCTCCGGACTTACGGAGACTCGGGTAAAACAAAGACCGTCACGCGCCGAAAATACAACAAAATCATGCAGACCCTGCTTCAGAACGAGGAGTCCGACGCTGTCTATGTCGACAACAGCCACATCAACGCCAAATTCAAATTCTGGGTGAAGTCCAAAGGCTTTCAGGTCGGCAGCAACATCTTGGGCGAGCACAACAAGAAAGAGCCATCGGGGAAGCCCGTCCTGTACGTCCCTGTCAAGTCAACGAGTCTACTGCATTTGCACCAAATGCTGACAGTAACAGATATACGACAGCTCACTTGTTCAGATGGAGGGGCGGCCCAGGACAGCTCTTTGAAGAGGGTTGCTGTAGTGGAGGATTTTTTTGATATCATCTATGCCATGCACGTTGAGATGGGGGCAGATCCTGGTAGAGCACCCAAACACGCCGGCCAGAAAAAGACCTATAAAGCGATTGCGGAGACCTACGCATTTCTTCCACGTGAGGCGGTGACTCGTTTCTTGATGAGTTGTGGAGAATGCCAGAAAAGGATGCACATCAACCCCAGCACGGCAGAGTTCAAAGAGAATGACCGGCCCACCTCCCTGGTCCCAGACCTCATCGATTACAACATGCCTCTCACTGCCACCTATCTAAAACAGATGAAGCTACAGTGCATGAACACTAATGAGCAGTATCTGGGCAAAGAATTTAATGTAAAAGTCACTCAGCTCAAAGGAACTGCGACAAGGCCTTATGGTGCAATGTGTGGTTGTCAAGGTTTGAGGACTTTGCCTGTGTCGAGATGCTGTGGAGGAGATATAGGAGAATCTAGTGATGATAGTGGGGATGAGAGTTCGGTAAGCAGTGAGGATTTGGACATGGCTGAGCCCGCGTGGGTCTCTACTGAGCGTGCTCAAGCCGCAGAGCCTAGCAGCCCCACCGCCCCGTACACAGAGAGGATGCCTACACCCCCACAGCCCAGCATTAAAGAGGAAGAAGATGATTCCTCTTCAGAGAATGGCAGCACAGTTAACGGTCTCCCTGCACTGACTCCGCCTGGTGGTGCTGCCATGGCGACAGGAGGAGTTCCTGCATCTGAGGGGGTGGTTCCATACGGAGAGGTGAACGGTAATGGTGCCGCAGCGCCGCTGGACTTCAGCACTACTTCATCGTCCTCTTCCTCACAGGAGGGACAGCAGTCTGTCAACCTGAGCGACAGACTATTGCCTGGGGTGACGCTTGGATCCTATTCATCTGACCCTAACAGAAAATTCCCTGTCAAAACTGAGTACGGTAACAAGTCGCCTCAGTACAGCTCAGGAAGCTATGACTCTGTGAAGACGGAACTGAGCACGTGCGGGGAAGACATGACCCCGGGTCGCTCTCAGATGTTTGTGCGGTTGTTTGTGGATGAGAACTTGGACCGGATGGTTCCAATCTCAAAGCAGCCCAAAGAGAAAATCCAGGCCATCATTGAGTCCTGCAGCCGCCAGTTCCCAGAGTTCCAAGAACGTGCTCGCAAACGGATCCGAACCTACCTCAAATCCTGTCGCCGCATGAAGAAGGGTGGCTTTGAGACACGGCCCACACCCCCTCACCTCACCTCCGCCATGGCTGAGAACATCCTTGCAGCAGCGTGTGAGAGTGAAACACGTAATGCTGCTAAGAGGATGCGTCTTGACATCTATCAGACCCATGATGAGTCGGTTACAGCAGACAAGCCAAACTCCAGAGATCCGGCTGCCCTGGTTAACTCAGGCTTCACACTGGCCGCCACGGCCTACTCCCAGGACCAACTCTACACCAATGGTGGACTTAATTACAGTTTCCGTGGATATGGGACCATTGGCAACAACCTCCAAAACAATGGCACATCACAAACCAATGGTCCTACTGATCTCAGTATGAAATCTTTGGCATCCAACAGCACTTCCTCCTCCAGTTCAAACAGTCATGGTCAGGGTGGAGGGGGTGGAGGGGCATCTGCCCAGCTCAGCCCACCCGAGGTCACGGCCGTTCGGCAACTGATTGCGGGTTATCGGGAGTCTGCGGCCTTCCTGCTCCGCTCTGCTGATGAGCTCGAGAACCTCATACTGCAGCAGAATTGAGAACTGCACACAGGCTGGTGCTGCCCGTCTCTCTCTCATAAACACACGTACACAAAATACATACTATGACAGGAAAGATACATGTAGCTATGTGCACTTACATACACATACACCTAAAGCCCATAGGCGGAGTTTCACTTCGCTTGAGGGAAGAAAAATGGAGGGGTCAGAAGAAGCTGTATCTGAAGCGCACGTACAGGGTCTAAAATTGATAACATTTACCAGCCATAATTTTCTCAGGTTCACTGGCCATGAACCTGTATTTTCTATATGAAATGCTACCTCTCATGAAAACTCTTTTGGTGGCTTAATTAGGATTAATAGTTTAATAGTTACAGAGGTGGGAAAAAATAAA

Function

symbol description
nol4la Orthologous to several human genes including NOL4L (nucleolar protein 4 like).
nol4l Located in cytosol and nucleoplasm.

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000010_00964665_01011716.mRNA True 2784 mRNA 0.51 15 964310 1011716

Neighbor

gene id symbol gene type direction distance location
CI01000010_00952202_00958971 PTK6 coding downstream 4927 951892 ~ 959383 (-)
CI01000010_00929453_00930078 NA coding downstream 33773 929061 ~ 930537 (-)
CI01000010_00902754_00903080 NA coding downstream 61080 902517 ~ 903230 (-)
CI01000010_00861290_00870510 NA coding downstream 93164 860480 ~ 871146 (-)
CI01000010_00810923_00813645 NA coding downstream 150440 810447 ~ 813870 (-)
CI01000010_01049083_01049298 NA coding upstream 37349 1047761 ~ 1049622 (-)
CI01000010_01064881_01066044 GPR173 coding upstream 52563 1064279 ~ 1066408 (-)
CI01000010_01146061_01150177 WASB coding upstream 134286 1146002 ~ 1150177 (-)
CI01000010_01156828_01164899 SLC38A5, SLC38A5B coding upstream 144429 1156145 ~ 1164899 (-)
CI01000010_01213593_01220154 NA coding upstream 201827 1213543 ~ 1220431 (-)
G61076 NA non-coding downstream 16735 945208 ~ 947575 (-)
G61085 NA non-coding downstream 32157 892327 ~ 932153 (-)
G61127 NA non-coding downstream 73478 885941 ~ 890832 (-)
G61117 NA non-coding downstream 119870 840761 ~ 844440 (-)
G61115 NA non-coding downstream 124187 838462 ~ 840123 (-)
G61153 NA non-coding upstream 7464 1019180 ~ 1019414 (-)
G61160 NA non-coding upstream 26513 1038229 ~ 1041213 (-)
G61161 NA non-coding upstream 32913 1044629 ~ 1045145 (-)
G61090 NA non-coding upstream 40828 1052544 ~ 1053837 (-)
G61045 NA other downstream 388799 572753 ~ 575511 (-)
G61888 NA other upstream 232753 1244469 ~ 1246018 (-)
G61965 NA other upstream 412709 1424425 ~ 1545051 (-)
CI01000010_03527436_03530341 NA other upstream 2517954 3527408 ~ 3530359 (-)
CI01000010_03890095_03899058 SSBP3B, SSBP3, SSBP2 other upstream 2878353 3890069 ~ 3899058 (-)
G64237 NA other upstream 3218234 4229950 ~ 4236416 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_036431 nol4la coding NC_007119.7 CM002892.2 23252850 ~ 23328264 (-)