G61045


Basic Information

Item Value
gene id G61045
gene name NA
gene type unknown
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000010
NCBI id null
chromosome length 12265998
location 572753 ~ 575511 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU69515
TGTATTTAAATTTATGATTCATTATGAACTTCATAACTGAAACTTTTACCTTCTAATGATTATTGCCAATAAGCATTAAAGTTTGTCTGCGCAAAATTAAAAATGAAGAGAATATTTAATATGCACTTGTTCATGTTTGCATTCTCACCTGAAACATGATCCTGTACTGTTCCTCCGGCCTGTTCACCACACACATGTTGCAGCCCATCTTGGCTTGTGATTTCCTGAGGGGGTGCGATTCCTCGATAAACTTCGCGTCCTGATTCTCCGACGTAGATGCCGATCCCTGCCTTCCAATTACAGTAATCCCTCCCTGAGATCAGAGGTTAAGACTCTGCACTCCATGAAAGGGCTTTGATGTGCTTTTCTTTGTCTGCTTTCCTCATTCAGGCCCCACTGCTGTTTTAATTGAGGTCCAACCCGGGAAGCGGGATCAGAGACGCTGTAGCATCCAGCCGTGAGAAAGTCAAGGTTTGATCTCTGATGAATGGAGCTTCTGATGTCTGTGTGCTTTTACTCAGCTTTCAATATACTCCAACATATATACTGGTTCAATGTGACAGCCTTTAAAACTTCACCTATGACAGAATTATGATGACGGGAATCAGACAGTATTATATTACACAGAAAATGTTTCATATCCCCAAAGTCTCTGCACTTGAAACAAGCAGCGAGCCGAGGATTAAATTCACAGATCCCACCGTGTCAGAACAATATAATCAAAGATGAGATCTGCTCAACGTAAACTCCCTGGTGCCAAAGTCGTAGACAAGTACATGAATTATTAAATAAAAGATGCAATAAACAAATATTTACTTTCCGCGCTCCGTATTCCCCTGAGTGATCCCTTCCTTCACTCTCTGTTTCTATTATTAGAGAGCTTGTTCCCTTCATTTACATATAACAACACTCTGTAGGCGCAGACATGCACGTCATGCTATTTGAAGTGCTTTAAAACATGTTGCTCGAGTCTGTGACTAGTGCCTGCTGCAGTACTGACTTGTTAAGTATTTCCGATGTTATTCTCTACAGTAAAACATTCTTGCAATTACAAGATGCTCATTAGCCTTCAGTATAACTGCAAGTCTAATGCCGTGCCTAATTTCATATTCCCCCTGCATAACATGTTGTATTTGACACCTGCATGTATTTATCTACAAAAGCACTCTATGACTGTGTCATCATCTTTTCCTCGTCCTCTATAAAGTGGGGATGTAATCCCACCTCTCATTTGCACTCACTGTGCAGATAAGAGTCTGTCGTTCACAGATCACATCAAACCTGCCCTCTTCCTTTCTTCCTGGAATTCCAGCTGCGTGTTCATGGCAGAAAATGAATGAGCAAGTGCACCTGTCAGATCATGTCAGAAACAGCCTCTCTCGCACTACAGAGGTAAGCTCAGCTCTTTCTCCGAACCAGATGTCAGTCTACAAGGACAGGTCTCTCCATCACATGACGGAGAGATGATTGAAAGGGATGAAGTGGAGTCTTGGAAGTATCTGATCTTCAGCAGGGAATGAATTGAACGCTGCCTTACATCTGCTTAGCTTCCGAGAGAAATCCAGATTCAGGAGAGGTGCATATTAGTCCACTGCTAAATGATGTTCCCTTATGTTTCTGCTCCTTGCGTCTGCATATTTGGGATGTAATCCAGCTTGCTTGAGCGTTTGAAGATAAATTAACTGGAGCTGTGCGTTTCCAACGAGAAAAACAAAGTCATTCAGTCAGATGGTGGGATGGTGAATCCGAAAAATCCGTTTGAGAATGTCTCAAGGCTGTGCTGGAGCGGCGCCAGCCCAGCGCTCGTACATGTGTGTCTGCAGAGAGAGGAAAAGCTGCTGGGTTGGAGGAAATGTGGGGATCGGCACCACTGCACAAGCTGGAGCCCATTACAGCTTTACAGCAGGCCCCTCCTCTCCCGGCAATACCAGCCAATATTCACCAGCCAGCTCTCAACTCTCCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCAGCCTCTCTCTTGTACTTATAGATGATAGCTTCACCCTCCCACCTTCCTTTCCTGCTTCCCTCATATCTTATTTCCCAGCCCCTCGTTGCTGTGTCTCTCTCTTTCTCTCTGTCACCTGTACTGGGAGACGCTCTTTGTTGCCTGTGGTGAAAGGGGCTGAGGATGCTGTCAGTCTCTGGCTGTCAGCACACAAACAGAATTTATGACCACATAGACCAAGCAGCTTTGAGTAGCGTGACACTTCCTTGTGGCCAATCTTTTTTTGTCTGAAAGCTTGCAACCATACTTCAAGAATGTTTGCAATAATGTACAAATGTTATTCATAATACAAAAATGAATGAAATTTAAAAAAATGTTTATTTTAATTATTATTTTTGTTTTTGTTAAAATAATAATGGTGTACTCAGTCATTTTTCCTCATTAAAAAGAAATGATTAGTACTGAATAGTACTGAATACTTTTTAACCACCTTATTACTGACAACTTTTGATTTTGTGTGATGCAGATATAGTGGCATGTAAACAATAATAGAATGGGTTTTTTTCCCCACTACAAGATACAGTCCCTGATATAAAAAAGAGCAAAAAGAATGTTTATTTTATTTTTATTTTTATTTCTTTTCTTTTCTTTTAATTTCTTTTCAATTTCATTTCATTTTCATTTTTTTATTTCTTTTGATTTCAATTATTTTAATTTTCATTTCATTTTCTTTTCATTTATTTTCATTTCATTTTCAATTTTATTTCCACTAGAAGATTTAGTCCCTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU69515 True 2759 TUCP 0.40 1 572753 575511

Neighbor

gene id symbol gene type direction distance location
CI01000010_00553512_00562038 NA coding downstream 10715 553413 ~ 562038 (-)
CI01000010_00532752_00544586 CSDE1 coding downstream 28167 532617 ~ 544586 (-)
CI01000010_00524503_00527976 APEX2 coding downstream 44777 524399 ~ 527976 (-)
CI01000010_00517865_00522058 NA coding downstream 50695 517512 ~ 522058 (-)
CI01000010_00421834_00427873 NA coding downstream 144610 421237 ~ 428143 (-)
CI01000010_00601570_00615159 IQSEC2 coding upstream 26059 601570 ~ 615159 (-)
CI01000010_00653231_00678240 NA coding upstream 77674 653185 ~ 679693 (-)
CI01000010_00691767_00731442 MAGIXA, MAGIX coding upstream 116256 691767 ~ 731442 (-)
CI01000010_00810923_00813645 NA coding upstream 234936 810447 ~ 813870 (-)
CI01000010_00861290_00870510 NA coding upstream 284969 860480 ~ 871146 (-)
G61035 NA non-coding downstream 7925 564608 ~ 564828 (-)
G60943 NA non-coding downstream 70065 486382 ~ 502688 (-)
G60952 NA non-coding downstream 132837 439195 ~ 439916 (-)
G61016 NA non-coding downstream 175369 397070 ~ 397384 (-)
G61013 NA non-coding downstream 186402 384872 ~ 386351 (-)
G61050 NA non-coding upstream 3158 578669 ~ 578948 (-)
G61051 NA non-coding upstream 3533 579044 ~ 579766 (-)
G61055 NA non-coding upstream 9305 584816 ~ 585087 (-)
G61043 NA non-coding upstream 20615 596126 ~ 596685 (-)
G61075 NA non-coding upstream 205296 780807 ~ 783522 (-)
G61888 NA other upstream 668958 1244469 ~ 1246018 (-)
G61965 NA other upstream 848914 1424425 ~ 1545051 (-)
CI01000010_03527436_03530341 NA other upstream 2954159 3527408 ~ 3530359 (-)
CI01000010_03890095_03899058 SSBP3B, SSBP3, SSBP2 other upstream 3314558 3890069 ~ 3899058 (-)
G64237 NA other upstream 3654439 4229950 ~ 4236416 (-)

Expression


Co-expression Network