CI01000010_01050815_01053323


Basic Information

Item Value
gene id CI01000010_01050815_01053323
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000010
NCBI id null
chromosome length 12265998
location 1050648 ~ 1053506 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000010_01050815_01053323.mRNA
TTATAAAAAATTGCCTATTTATCTAAATCTTTCACTATTTCTGTACCACAGGGTTTTGCACCTTATTTGATAACAAATAAGCGTGTGTTTACTTATTTGGATCCTGACATCTATAGGACTCCCAATTGAAATTTTTGTTTCATAGGTCTTTCAGATTTCACTGAACAATGAGGAACTGCACGTTCATGGGAGGTGGGATCCCTTTGTCATCTGAGTTCTTTAAAGTGAAAAAGATAACACAGATGAAACTGCTCGTCTTTGGAATGACGTCTATAATTGCGCTATATGTTCCACGCTCCTCATCTCTGTGCAGTTTCATTGCGTCTCTATATCACTCTATTACACTCTTGAAGTTCATGGGTCTTATCAAAGACTTCTTTGGTGGAAAGGTCCGCATGCTGGAGGCATTAGCAGGGGAGAAGGTGTCTCCAAACCCCTTCCCCTGTTGCTGCTGCTGCTGTCTTCCTCTCTTTGACATCAACAAGACCAGTGTGGGCTGGATGATGGCTGCTGTTCTTCAGCTCTCTGTGGTCAGAACAATCCTGTTCTTCCTCACTCTTGTCCTCTGGACAGATGAACAGTATGACTATGGGGATGTTAATTCGGTTACTCTCAACATGTATGTCAATGCCATCATTGCCGTATCCACGTTTCTGTCCTTCTATGGCTACTTGCTGTTTTATAAAGCTACAAAAAGGGCATTGCCTGGATACAGTCTTCGAGCCAAGTTTATTTGCATCATTGTTGTCCTGGTCCTTTGTGGACTACAGAGTGGAATTCTGGAGACCATGGGTGCGCTGAATGTCATCCCCTGCACTCCTCCCTTCTCTGAACTTTTTCGTTCTCAATTAATCTACCACTATTCTGTAATTGTGGAGATGTTCTGCATCAGCCTCTTTGCACATCACATATTCCGGAAAGTTGAACCCTGTCAAGATGAGGGTGAAGAAATGGAGATTGATGTCATAAGAGTTCTCAATGAAAAGGCAATTCAGACAGAAGACGAGCTGCCAATTGCTGTGCAGCTCTCCTCTCAAGAGGATGAGCCATGCCATTCTAACCTTGGATACAACAGCGACAGTGAAGACAGCCTCTGTAAAATTGAACACGCACCACTGGACCGCTTCACTTTTCCCTTACAGCACAGACAACAAACTGCAGCAAACTTGGAGAAAGTATATAATGCACCACCTGAGGACTCCATGAGTGTGGAGCTGCCGACAATTACTGTCAGTGCTGAAATTAACCATATTGACAGTGGTGATGTTACTGTTGTATAGAAGAAAAAGAGAGAAAAATGTATAAATGTATAGTTTATTCCACTTTATATGTCTATGACTCCACTGGGCCCTGGGAAGTTAAACAAAGAACAAGTGCCATTTGAATTGTAAACTCACCAGCATAGCAAGTTTTTTGTAATCTTTAATATAGCACATACAGTTTACTATTATTAGTACATTTAA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000010_01050815_01053323.mRNA True 1463 mRNA 0.42 7 1050648 1053506

Neighbor

gene id symbol gene type direction distance location
CI01000010_01046137_01048306 MAPRE1A coding upstream 2130 1045957 ~ 1048518 (+)
CI01000010_01029244_01041878 DNMT3BA coding upstream 8291 1028849 ~ 1042357 (+)
CI01000010_00946586_00947327 NA coding upstream 103071 945182 ~ 947577 (+)
CI01000010_00944226_00945123 NA coding upstream 105470 944226 ~ 945178 (+)
CI01000010_00934527_00937510 NA coding upstream 112672 934527 ~ 937976 (+)
CI01000010_01055064_01058564 SUV39H1A coding downstream 1558 1055064 ~ 1058788 (+)
CI01000010_01062352_01063144 NA coding downstream 8846 1062352 ~ 1063259 (+)
CI01000010_01083156_01088679 NA coding downstream 29325 1082831 ~ 1089711 (+)
CI01000010_01106177_01115314 NA coding downstream 52088 1105594 ~ 1115401 (+)
CI01000010_01131796_01139972 SEMA3GB coding downstream 78290 1131796 ~ 1140066 (+)
G60915 NA non-coding upstream 31163 1019017 ~ 1019485 (+)
G60852 NA non-coding upstream 91601 948857 ~ 959047 (+)
G60817 NA non-coding upstream 261222 788888 ~ 789426 (+)
G60801 NA non-coding upstream 314639 727837 ~ 736009 (+)
G60780 NA non-coding upstream 372541 673066 ~ 678107 (+)
G61218 NA non-coding downstream 196739 1250245 ~ 1250446 (+)
G61220 NA non-coding downstream 198830 1252336 ~ 1252899 (+)
G61219 NA non-coding downstream 199562 1253068 ~ 1253739 (+)
G61221 NA non-coding downstream 200470 1253976 ~ 1255045 (+)
G61222 NA non-coding downstream 201832 1255338 ~ 1255572 (+)
CI01000010_00881905_00883563 NA other upstream 167134 881195 ~ 883684 (+)
CI01000010_00826648_00831638 NA other upstream 212216 826648 ~ 832705 (+)
CI01000010_03197380_03199958 NA other downstream 2140649 3197380 ~ 3200044 (+)
CI01000010_03320340_03346243 NA other downstream 2260189 3313695 ~ 3347796 (+)
G62838 NA other downstream 2836589 3890095 ~ 3893793 (+)
G62856 NA other downstream 2884251 3937757 ~ 3939945 (+)
G62983 NA other downstream 3394666 4448172 ~ 4449327 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location