CI01000010_01106177_01115314


Basic Information

Item Value
gene id CI01000010_01106177_01115314
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000010
NCBI id null
chromosome length 12265998
location 1105594 ~ 1115401 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000010_01106177_01115314.mRNA
TTATATAAACAGCCCATTAAAGGCACATAAATATTCACACAGATGCTTTTCCAGGCATATTTCAAGGAGATATGGATAGTTAATACTTGTACAAACCTGTTGACATAATGTTTTAAGCTTGATGGGGAACATTTGTCATGAGAACAGAATTAGTTCTTTCTTCAGCTATAATTCGCAAACAATTTGTTGGACATCAGTGCTTGTCAATGTTGACAACTCCCTTTCTTTAAATTTTTAAAATATCCTTTGTTTTTAATTCATTTGTCATTTCAAACTTTTCACTTTCAGACCAACCACTGCTCAAGTTCACAGAATTTTTGTTTTACTAGTTTAAAATTCCCCCAAATCTTTCTAGTGAAATTATTATAATGGATATTCTATGCTTCCCTTAACTTAAACATTAAGGCTTTTATCCCTCTCCCAGTTTTGTCTTAATTCAGGGAAATGATCTTTACCTCATGTTGTTTTTTTGCGCATTTCGACATTCATTTAGCTTTTTTTGTTCACTCCGTAAATGACACACTTAAATTCCCATTTGTCACAAGTGCCTCTCTCTCTCTCCCACACACACACACACACAAACATGGAGAGAGATGCACTCATGTATACACTTCTCACTCTCTACAAATACAACAAGCCTCTTGAGACGGTTGTCATGACAGCGTCAGCGGTGCTGGGGGACTATCTGGAAAATGTAATGTGCATAACAACATTGCATCCTATCATGAGGTCCCCTGATGCTGGAAAACAGCTGTCAGCTATGAATAGCAGAGGCCATGCTGGTGGGGTAATTGTAGAGGAATTCAGTGTTTATCATGTAAATAAAAGAAGAGAGGCCATCAAAACAGGTGTTGATTTACTGAAAAGTGGTTACAAAATCTTCAGAGGCCTAGAGGTTGCTGGCCGCTGTGGTTTAAAAGCACAGTGTGAGTATCAGTTGAAGCTCTCAGCTGTGACTGTTTTTGTAAGCTCTAAAAAGATTACATCAAAGGACAAAGATGTCAAAGAGGAGACTGGACAGACATGTAAGGACGAGTCTTCTGTCACTGTAAAGACGGATGAAGACCATGAGGTCTTCAAATTGAGAAATGGCCTGTCTTCTGTGGAGGAATGTGTGGCACAGGGTTATCGGCTCTAGACAATCCCTGAATTTTCTCAGATCATTTTGTCTGACTAGATGAGCTGTTAGACATGCACCCTTGAAATTCTTAGCTGTATAGTTTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000010_01106177_01115314.mRNA True 1225 mRNA 0.38 6 1105594 1115401

Neighbor

gene id symbol gene type direction distance location
CI01000010_01083156_01088679 NA coding upstream 15883 1082831 ~ 1089711 (+)
CI01000010_01062352_01063144 NA coding upstream 42335 1062352 ~ 1063259 (+)
CI01000010_01055064_01058564 SUV39H1A coding upstream 46806 1055064 ~ 1058788 (+)
CI01000010_01050815_01053323 NA coding upstream 52088 1050648 ~ 1053506 (+)
CI01000010_01046137_01048306 MAPRE1A coding upstream 57076 1045957 ~ 1048518 (+)
CI01000010_01131796_01139972 SEMA3GB coding downstream 16395 1131796 ~ 1140066 (+)
CI01000010_01175042_01186800 CCDC22, CCD22 coding downstream 57584 1172985 ~ 1187302 (+)
CI01000010_01189138_01199101 NT5DC2-B, NT5DC2 coding downstream 73737 1189138 ~ 1200021 (+)
CI01000010_01202099_01209001 TBC1D25 coding downstream 86698 1202099 ~ 1210173 (+)
CI01000010_01227374_01232982 PPARDB, PPARD, PPARB2A coding downstream 110214 1225615 ~ 1233865 (+)
G60915 NA non-coding upstream 86109 1019017 ~ 1019485 (+)
G60852 NA non-coding upstream 146547 948857 ~ 959047 (+)
G60817 NA non-coding upstream 316168 788888 ~ 789426 (+)
G60801 NA non-coding upstream 369585 727837 ~ 736009 (+)
G60780 NA non-coding upstream 427487 673066 ~ 678107 (+)
G61218 NA non-coding downstream 134844 1250245 ~ 1250446 (+)
G61220 NA non-coding downstream 136935 1252336 ~ 1252899 (+)
G61219 NA non-coding downstream 137667 1253068 ~ 1253739 (+)
G61221 NA non-coding downstream 138575 1253976 ~ 1255045 (+)
G61222 NA non-coding downstream 139937 1255338 ~ 1255572 (+)
CI01000010_00946586_00947327 NA other upstream 158050 945182 ~ 947577 (+)
CI01000010_00881905_00883563 NA other upstream 222080 881195 ~ 883684 (+)
CI01000010_00826648_00831638 NA other upstream 267162 826648 ~ 832705 (+)
CI01000010_03197380_03199958 NA other downstream 2078754 3197380 ~ 3200044 (+)
CI01000010_03320340_03346243 NA other downstream 2198294 3313695 ~ 3347796 (+)
G62838 NA other downstream 2774694 3890095 ~ 3893793 (+)
G62856 NA other downstream 2822356 3937757 ~ 3939945 (+)
G62983 NA other downstream 3332771 4448172 ~ 4449327 (+)

Expression


Co-expression Network