CI01000010_04496312_04498116


Basic Information

Item Value
gene id CI01000010_04496312_04498116
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000010
NCBI id null
chromosome length 12265998
location 4495851 ~ 4498191 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000010_04496312_04498116.mRNA
AAAACCAAACTCCACATGGCACCTTGGAAGTAAGGAGACAACATGGACACAGTTGTCACATAGTCTTTTCTCTCAATGAGAAGGACTCGTGGAGAGCTTGTTGAGAAACTCTTGAAAGCCTGTCATTCAATGAAGTCCGGCCGCTATCACAGGGTTCGAGAGGAGAGAATGATACGCTTGAGCAGCCTTCCTCTCCGGAGGCACTCTTGGATATGCAACCCTCTCATCTTTCAAATACAGGGACAATTTTTTCTTGAATCACTGGAGGCCCATCATGTAATCCCTGACGGTGAACTTGCCAAGGCGCTGATTTTCCCTGGAAGTACAGGCGCTTGTGTAGCACTTCTCATCCCTTTAGCTCAGCGGAGAGGCTTGGCTGATAGATGCTTTATTGAATCTGCCGCTGGGCTCCTTGACAACAGTGAGGAACGAGTGGGTGTCTCGCTATTAGTTCACAATAAGAACACAGTGTCAGCACAGTCAGCGGGCGGCAATCAGCTCCATCCGTATTTCCAGCCCTGTTGATGCGGGAAGAATAGTGCCTGAAGCGACTAGCATCGTTAGCGGCCCACCAATGCTAACCCGATTCGTTGCTGCCGTCATATTTCCTGTATGTTTCAAAACATCTCTCATGTCAGTGTGTGGGCTGCCGCATTTCATACATGGATAGTCAGGCTTACACAATCTGTTTGTGCGGTTGACGATAGTTTAACGGATGCGTCGGGAACATCAAATACTCTAAGGATGTGCACTGTAGCTTCCTTTAAGGGACAAGGGGTTGCGTGACTAACCCAAATAACAACATTGTTAATTCACGCCAACTTTCACCCCTACTTAACAGCACCTTTTCAGTCTTATTCATTTGTCTGGAATGACTGCAGTCGATATGCTAATTTTACGTCATTAGTGTGATAGTTGTTTTTTAGGCACACAAAGTTGTTCACATTAAGTCAAAAACCGCATCATTGCAGGATAATCGTAATAAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000010_04496312_04498116.mRNA True 986 mRNA 0.46 2 4495851 4498191

Neighbor

gene id symbol gene type direction distance location
CI01000010_04445984_04469908 PDE4D coding downstream 25562 4445560 ~ 4470289 (-)
CI01000010_04433165_04436747 NA coding downstream 58922 4432907 ~ 4436929 (-)
CI01000010_04426092_04431357 PLK2B, PLK2 coding downstream 64464 4425424 ~ 4431387 (-)
CI01000010_04383043_04410672 MIER3B coding downstream 83519 4382871 ~ 4412332 (-)
CI01000010_04374856_04376532 CENPH coding downstream 118905 4374508 ~ 4376946 (-)
CI01000010_04559649_04573405 NA coding upstream 61429 4559620 ~ 4573979 (-)
CI01000010_04590937_04594873 ELOVL7 coding upstream 91985 4590176 ~ 4595855 (-)
CI01000010_04597295_04608873 ERCC8 coding upstream 99085 4597276 ~ 4608985 (-)
CI01000010_04612793_04613017 SMIM15 coding upstream 114269 4612460 ~ 4613135 (-)
CI01000010_04631540_04638983 NA coding upstream 133287 4631478 ~ 4639007 (-)
G64382 NA non-coding downstream 212766 4282756 ~ 4283085 (-)
G64237 NA non-coding downstream 259435 4229950 ~ 4236416 (-)
G64332 NA non-coding downstream 274923 4217753 ~ 4220928 (-)
G64169 NA non-coding downstream 436699 4057217 ~ 4059152 (-)
G64280 NA non-coding upstream 6202 4504393 ~ 4521646 (-)
G64411 NA non-coding upstream 79553 4577744 ~ 4578094 (-)
G64418 NA non-coding upstream 115974 4614165 ~ 4615086 (-)
G64421 NA non-coding upstream 144698 4642889 ~ 4644040 (-)
G64249 NA non-coding upstream 182473 4680664 ~ 4681232 (-)
CI01000010_03890095_03899058 SSBP3B, SSBP3, SSBP2 other downstream 595940 3890069 ~ 3899058 (-)
CI01000010_03527436_03530341 NA other downstream 964199 3527408 ~ 3530359 (-)
G61965 NA other downstream 2950800 1424425 ~ 1545051 (-)
G61888 NA other downstream 3249833 1244469 ~ 1246018 (-)
G64564 NA other upstream 550964 5049155 ~ 5242926 (-)
G64877 NA other upstream 1418066 5916257 ~ 5917011 (-)
G64918 NA other upstream 1595498 6093689 ~ 6096480 (-)
G65453 NA other upstream 3165500 7659435 ~ 7672343 (-)

Expression


Co-expression Network