CI01000010_04631540_04638983


Basic Information

Item Value
gene id CI01000010_04631540_04638983
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000010
NCBI id null
chromosome length 12265998
location 4631478 ~ 4639007 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000010_04631540_04638983.mRNA
ATCATTCTCTCAAAATCCACAGTCATGGGATACATCATTAAAGCTTTCCAGCTGCACTGTATACCGCTGCACACACTCACCTGTTTCAGGCAGTCTGTGGCAACCCTTGACACACAGGACACATCAGCCAGCAGCATCACACCGCTGTATGAGCTCCACTGCGCGCAGGAGACGCCTGCCAAATACCTTGAACACAAGGAAAAAGTAATGAAGGGGGGTGGTGAAAACGCCATTGCACGGCATACGCAGAGGAATCGAAAGGTCCTGGTACGAGACAGACTCCGCATGCTGCTGGATGATGAAGATTATTTAGAACTTTCTCCTTTTGCTGGACTTGGTCTGCCCTATGGAGACATTCCAGCAGCAGGCTGTCTCACAGGAATTGGTAAAATTAATGGACTTTGGTGCATGTTCTGTGCTAATGACGCCACTGTGAAAGGAGGTACAGCGTATCCCATCACAGTTAAAAAGCAGCTCAGGGCGCAAGTTGTGGCTATGCAGAATCGTTTGCCTTTCGTTTACTTGGTGGACAGTGGTGGTGCATTTCTGCCTCTTCAGTCAGAGATCTTTCCTGATAAAAACCATGGAGGACGCACCTTTTACAATGAAGCAGTTATGTCAGCAATGAAGATTCCTCAGGTGTCAGTAGTGTGTGGGTCATGCACAGCTGGTGGTGCCTATGTTCCCACTATGTCTGAGGAGGCGGTGATTGTCCACAGGATAGGAACAATATTTTTAGGGGGACCACCCTTGGTGAAGGCTGCAACCGGGGAGGAGGTTTCTCCAGAGGACCTGGGAGGAGCCAGGCTACACTCAGAAGTGAGCGGCTGTGTGGACCATTTTGCCACAACAGAGAATGAGGCATATGAGCATACCAGAAACATCATCTCCACCCTAAACTATGAGCTCCCAGAGGAAGACGACACTCCGGTTGAGGAGCCCCTGTACAGCATGGACGATCTCATGGGCCTTGCACCTCGTTGCTACAATCACAGCATGGATGTCAGACTGATAGTGAGTCGCCTTACTGATGGTAGTCGGTTTCAGGAGTTCAAGGCCCGTTACGGTACCACCCTCCTCACTGGGTTTGCCAGAATTGAAGGACATCAGATTGGAATTGTGGCAAATAATGGAGAGCTGACGTATGAAGCTTCCCTGAAAGGCAGTCACTTTGTTCAGCTGTGTGACCAGAGGGACATTCCTCTCATCTTCCTGCAGAACACGGCACCAGAACCTGCACACACACTCTCACAAACCAAGGCAGAGTCCAACACTAACAGACTGAAGGCTCAGGGTTCCATGATGTCTGCTGTGGCTTGTGCTTCTGTTCCAAAAATGACTGTGGTTATTGGAGGATGTCATGGAGGCGACAGCTATGCTATGTGCGGAAGGGCTTTTGACCCTAATTTCCTGTTCCTGTGGCCTAATGCAAGAGTGTCAATTTTGGCTCCAGGCCACTCAGAGGCATTTGTGCAGACTGAAGAGGAAATCACACAGATTAATGAGATGTTGGAGGAAGAGAGTTCAGCATTCTTTTCTACCGGCAGACTGTGGGATGATGGTGTTATTCTACCTCAAGACACCAGAAAGGTTTTGAGCAAGTGCCTGAAAATCATTAAGCAACAAGAGTATCAATTGTCCAGAGAGAAGATAAGGACTCCCTTTCTCCGAATGTAACACTAACAGAAACAGTCATTGGACTTTTTAAACTTGTATAAGGTCTTTATTAAAGTAATAAA

Function

GO:

id name namespace
GO:0005575 cellular_component cellular_component

KEGG:

id description
K01969 E6.4.1.4B; 3-methylcrotonyl-CoA carboxylase beta subunit

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000010_04631540_04638983.mRNA True 1739 mRNA 0.48 12 4631478 4639007

Neighbor

gene id symbol gene type direction distance location
CI01000010_04612793_04613017 SMIM15 coding downstream 18343 4612460 ~ 4613135 (-)
CI01000010_04597295_04608873 ERCC8 coding downstream 22493 4597276 ~ 4608985 (-)
CI01000010_04590937_04594873 ELOVL7 coding downstream 35623 4590176 ~ 4595855 (-)
CI01000010_04559649_04573405 NA coding downstream 57499 4559620 ~ 4573979 (-)
CI01000010_04496312_04498116 NA coding downstream 133287 4495851 ~ 4498191 (-)
CI01000010_04777992_04782638 CDKN2C coding upstream 138857 4777864 ~ 4782672 (-)
CI01000010_04958548_04988116 ELAVL4, ELAVL4.L coding upstream 318752 4957759 ~ 4988920 (-)
CI01000010_04997746_05004248 NA coding upstream 358379 4997386 ~ 5004248 (-)
CI01000010_05151648_05156807 NA coding upstream 512379 5151386 ~ 5157078 (-)
CI01000010_05320989_05321993 NA coding upstream 681918 5320925 ~ 5323026 (-)
G64418 NA non-coding downstream 16392 4614165 ~ 4615086 (-)
G64411 NA non-coding downstream 53384 4577744 ~ 4578094 (-)
G64280 NA non-coding downstream 109832 4504393 ~ 4521646 (-)
CI01000010_04433165_04436747 NA non-coding downstream 194204 4432907 ~ 4436929 (-)
G64382 NA non-coding downstream 348393 4282756 ~ 4283085 (-)
G64421 NA non-coding upstream 3882 4642889 ~ 4644040 (-)
G64249 NA non-coding upstream 41657 4680664 ~ 4681232 (-)
G64231 NA non-coding upstream 51265 4690272 ~ 4692617 (-)
G64428 NA non-coding upstream 85810 4724817 ~ 4744762 (-)
G64436 NA non-coding upstream 106236 4745243 ~ 4747286 (-)
G64237 NA other downstream 395062 4229950 ~ 4236416 (-)
CI01000010_03890095_03899058 SSBP3B, SSBP3, SSBP2 other downstream 731567 3890069 ~ 3899058 (-)
CI01000010_03527436_03530341 NA other downstream 1099826 3527408 ~ 3530359 (-)
G61965 NA other downstream 3086427 1424425 ~ 1545051 (-)
G64564 NA other upstream 410148 5049155 ~ 5242926 (-)
G64877 NA other upstream 1277250 5916257 ~ 5917011 (-)
G64918 NA other upstream 1454682 6093689 ~ 6096480 (-)
G65453 NA other upstream 3024684 7659435 ~ 7672343 (-)
CI01000010_07880416_07900104 NA other upstream 3203629 7880375 ~ 7900104 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location