CI01000010_05494740_05504597


Basic Information

Item Value
gene id CI01000010_05494740_05504597
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000010
NCBI id null
chromosome length 12265998
location 5493967 ~ 5505261 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000010_05494740_05504597.mRNA
ATATAAATGGCATCCTTCAGGAACCTGGAGGTTCTGCCCCCTTTAAAATCTGATCCCTTAAAAACAAATCTGATATGAGCATGGCCGCTTTTTCCACTATATGTTCCTATTTTTATTTTTAGTAAGGTCACAGTTGCCCTCCTAAAATCACCAGTGTATATGAGCATCATGACTCAGACCCCTCACTTCCCCTGACGCAGGAAGTCCAGATCTGTCGCCTCAGAGGAGCATGACTATCCCTCACACTCTGAGACATGTGAGACAAATTAATCTGAAACCAAAAGGGGATTCCTGACTAGCCAGGATGATAACTCAGTAACACTGATCTGTGGATTTTAATGTCTCCTAGCCATTACACACCACATGAAAAACAGCACCAGTGAATGGAGTCTCGTGTTTCAGGGCCCCGGGACAGCGCACAGGTGCTCCAGGTGCATAAATGTACAGCTGAGGTATTCATAGAGGGATTTCATAACATTGCAAAGTGCCCTGATCAAACCATTAAAAACCTGCTGTGTTGATCTAGTCATTATACACCAGAACACCCAGACTGTGTAAAGAGTTACATAAACACAAATAAAAAAAAGCCTCAAAAGTGATTTACAGGTGTATGACAGCTGTAGTCTGATACAGCGCATATATTTTCTTATTCTTTAAGAACAAAAGGACCAGCACAACTGTTATCTTAGGGTTTGTTAAATCTAAAATTATACTGAAGAACAGCATTAAAGGAGCACAGTCACATGATAAACTGATTCAGGACGTTGGTGGTCATGGATCAGTGCATTTTTGGGGGCGGAGGTGACTGTGAGCTGAGGATGATGGCAGAAGGGAGGTTTTCCAGTCTGCCCAGGAACATGCACGTTGGGCGGCAGTGCCCGCTCGCATCTTCCATGGATCTCCTAAGCTCACGGGCCGCCGTGGCAGAGATGCCGGTCAGCGGCTACCAGGGCGTCTCCATCCATGGAACACTGCCTCGGAAAAAGAAGAATAGCACTGGTTCCCCTGTGAAGCAGTGGGAGATGAATGAAAACATGGGATCATCAGCAGCTCCATACCCAGGTCGATATCGCCTGCCACCGTCACCGCTAATTCACAACATTATTGAGGAACACCAGGCTTTCTACTCAAACAGGAAAGGCAGCGTCACATCCAGATTAATCAGAGTTGGAGACTCGTATGGCATTGTGATTAAATGTCAACCTCCTGAACGTCGGGCTGCAGAAATGTTCCACCAGTTTGAGTGTGTCTGTCTGCAGAACCCACTCAGCACCCTTATAACATGGCCTTGTCTCGAACTTTCTAATTCTGACTGGCGAGGCTTTGTGAGGTGCCACCTCCACACTGAATCTGAAAGCCACCCTTATTCCCCTAAGGGGGGACGGTGCAGGAATGGACCCTACCATGGAGTATGTCAAGGAAACTCTACAGCCAAAATTTTCGATAAAGATCTGACAATCTCTGCGTTTCCTACTGTGCGAGGGGCCCCTGTAGACACATCCTCAATTAAAATGGCACAATTAGGAGGAGGAAATGAGCTGGTGATGTTTCAAGGTTCTGCAAAGAGCATATGTAGTTTAAATTATAGTATCAAGTTAGGAACAAATGACAAATTTCACTTTACCAGCAAAGGCATAATCATTCCCTGGCTTTATTTTGACCCGAGGCACCATCTAGCCATTATGAAAGCTCTTCATCACACAACATGGCTGTATTACAGCACCCACGACTCATATCTGATGAGAGATATGGTGTGACATATATCTGGGGTTTATATGAGATTTTCCACTGTGATCACCTGCAGCCTTGAGTGTGCTGACACCACACAGCCACCTCGGTCAGCCTGCTGAGAAACCATCCGTCACTCTCTCCGTCCCCCTTATACTCAGTAGCTCAGTGGTTTGCCTCATCTTGGGGTCTAGCAACTCACTGCGAAGAACAAACTTCTCTTAGCATTACCTCACACAGACAACAAACCAAAGCAAACAGCACAAACACACTGTCAATAGCAACACTGTAGCAGTGCTCCAGTGCAGTTGAACATACAGTCATACAGTTGCCATAATGAAATACAATTTCATAAGATGTCATTACAGAGTGAATCTTACAGCCGGTCAAGAACATGTTTGTGTCATATTTCACCCGAAAATCAAAAGAAATAAAAAAGGAAATTATATAATGGACAAGCCAATTGTTTATTCCATTATACATTTTTTCAACTATTAAACACATTTTACCCCTCATATATATGTGTGTGTGTGTATAATACATACATATATATATATATATATATATATATATATATATATATATATATATATATACACATACACACACACACACACACACACACACATACATACATATATTAAATTAAAGGTATTTATATTTAATTTATTTATTATTGCAGTTAAAACTGTA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000010_05494740_05504597.mRNA True 2421 mRNA 0.43 8 5493967 5505261

Neighbor

gene id symbol gene type direction distance location
CI01000010_05477048_05482911 NA coding upstream 10666 5476525 ~ 5483301 (+)
CI01000010_05414058_05426498 NA coding upstream 67280 5414058 ~ 5426687 (+)
CI01000010_05359191_05385419 NA coding upstream 108283 5359191 ~ 5385684 (+)
CI01000010_05308426_05318353 BEND5 coding upstream 174871 5308292 ~ 5319096 (+)
CI01000010_05238328_05242974 NA coding upstream 250571 5237029 ~ 5243396 (+)
CI01000010_05523602_05535371 BCAR3 coding downstream 18255 5523516 ~ 5535692 (+)
CI01000010_05789479_05790006 NA coding downstream 283071 5788332 ~ 5790204 (+)
CI01000010_05819188_05855120 CEP350 coding downstream 313927 5819188 ~ 5855163 (+)
CI01000010_05859214_05887437 NA coding downstream 353953 5859214 ~ 5888267 (+)
CI01000010_05902969_05911426 LHX4 coding downstream 397708 5902969 ~ 5912165 (+)
CI01000010_05012978_05018219 NA non-coding upstream 475844 5011379 ~ 5018346 (+)
CI01000010_04934550_04955403 NA non-coding upstream 494892 4933856 ~ 4956630 (+)
G63162 NA non-coding upstream 501477 4983616 ~ 4992490 (+)
G63151 NA non-coding upstream 540204 4953542 ~ 4953763 (+)
G63149 NA non-coding upstream 547299 4946465 ~ 4946668 (+)
G63359 NA non-coding downstream 64910 5570171 ~ 5579186 (+)
G63328 NA non-coding downstream 86115 5591376 ~ 5591852 (+)
G63332 NA non-coding downstream 128926 5634187 ~ 5638232 (+)
G63384 NA non-coding downstream 137616 5642877 ~ 5643077 (+)
G63386 NA non-coding downstream 139395 5644656 ~ 5645797 (+)
CI01000010_04640858_04683752 OSBPL9 other upstream 839974 4640516 ~ 4683778 (+)
G62983 NA other upstream 1044640 4448172 ~ 4449327 (+)
G62856 NA other upstream 1554022 3937757 ~ 3939945 (+)
G62838 NA other upstream 1600174 3890095 ~ 3893793 (+)
CI01000010_03320340_03346243 NA other upstream 2162781 3313695 ~ 3347796 (+)
G63403 NA other downstream 190184 5695445 ~ 5707085 (+)
G63405 NA other downstream 202710 5707971 ~ 5717250 (+)
G63524 NA other downstream 869297 6374558 ~ 6374667 (+)
G63572 NA other downstream 1080667 6585928 ~ 6617806 (+)

Expression


Co-expression Network