G111703


Basic Information

Item Value
gene id G111703
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035909.1
NCBI id CM008312.1
chromosome length 44161018
location 17331976 ~ 17332199 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU150979
AGTGTTGCCAAAGCATTATAACAATTAACAACAATGGTATAGGAACATACATAACagacataataacatttataacagaacataatgattattattattatgataattatatcatttatcaataattataattatataataataatatttttctcTGGGATGGGGTCCCCAGGATTTTGAGGTGTTACCCACTGTCTCTCAGGCTGTGACACGCActaacgtat

Function

NR:

description
PREDICTED: protein 4.1-like, partial

GO:

id name namespace
GO:0071805 potassium ion transmembrane transport biological_process
GO:0034220 ion transmembrane transport biological_process
GO:0098655 cation transmembrane transport biological_process
GO:0098660 inorganic ion transmembrane transport biological_process
GO:0098662 inorganic cation transmembrane transport biological_process
GO:0015672 monovalent inorganic cation transport biological_process
GO:0006813 potassium ion transport biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU150979 True 224 lncRNA 0.29 1 17331976 17332199

Neighbor

gene id symbol gene type direction distance location
bcl6 bcl6,LOC107752633 coding downstream 611852 16668516 ~ 16720124 (-)
trnap-cgg_2 NA coding downstream 948679 16383226 ~ 16383297 (-)
trnap-ugg_4 NA coding downstream 949138 16382767 ~ 16382838 (-)
trnap-ugg_3 NA coding downstream 949840 16382065 ~ 16382136 (-)
trnap-ugg_2 NA coding downstream 954028 16377877 ~ 16377948 (-)
tbc1d23 tbc1d23,LOC107574489,LOC107752629 coding upstream 139636 17471835 ~ 17498523 (-)
LOC103040564 LOC108443440,LOC108273224 coding upstream 182610 17514809 ~ 17552339 (-)
chpf chpf coding upstream 557050 17889249 ~ 17910481 (-)
LOC103043861 LOC108437841,LOC107566327,LOC107705612,LOC107748546,LOC107566796,LOC107688845 coding upstream 659205 17991404 ~ 17999869 (-)
LOC103039642 des,desmb,LOC108437828,LOC107660100,LOC107705613,LOC107566324,LOC107566784 coding upstream 747159 18079358 ~ 18092036 (-)
G111697 NA non-coding downstream 16481 17315289 ~ 17315495 (-)
G111696 NA non-coding downstream 19842 17311389 ~ 17312134 (-)
G111687 NA non-coding downstream 162862 17069420 ~ 17169114 (-)
G111654 NA non-coding downstream 571124 16752704 ~ 16760852 (-)
G111640 NA non-coding downstream 668575 16659851 ~ 16663401 (-)
G111753 tp63 non-coding upstream 119834 17452033 ~ 17453120 (-)
G111746 NA non-coding upstream 167288 17499487 ~ 17500840 (-)
G111764 NA non-coding upstream 199214 17531413 ~ 17546938 (-)
G111773 NA non-coding upstream 226108 17558307 ~ 17564953 (-)
G111774 NA non-coding upstream 228121 17560320 ~ 17564022 (-)
G111664 NA other downstream 564671 16764687 ~ 16767305 (-)
G110969 NA other downstream 3470901 13860585 ~ 13861075 (-)
LOC103038496 gbg12,LOC103038496,LOC108271932,LOC105895117,LOC107705318,LOC107555383,LOC107564436,LOC108437694,LOC107678346 other downstream 4278104 12930798 ~ 13053872 (-)
LOC103045540 LOC108430857 other downstream 6353887 10949959 ~ 10978089 (-)
LOC107197509 NA other downstream 7793924 9523898 ~ 9538052 (-)
G111763 NA other upstream 191447 17523646 ~ 17524386 (-)
G111970 dnpep,LOC106575848 other upstream 771630 18103829 ~ 18104458 (-)
G112029 NA other upstream 1300002 18632201 ~ 18632860 (-)
G112125 NA other upstream 1892403 19224602 ~ 19225084 (-)
LOC103029406 LOC556764,LOC108424762,LOC105913225 other upstream 2134354 19466553 ~ 19479907 (-)

Expression


Co-expression Network