G112125


Basic Information

Item Value
gene id G112125
gene name NA
gene type unknown
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035909.1
NCBI id CM008312.1
chromosome length 44161018
location 19224602 ~ 19225084 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU151548
TCCCCAAGAAGAGCCCCCCCACCTGCTTGAATGACTACAGGCCAGTAGCACTCACTCCGATCattatgaagtgcttcgagagagTGGTGCTGGCCCACATCCAGCACAGCATACCGGACACCCTGGACTCACTGCAGTATGCCTACCGTCATAACAGATCCACCTCAGACGCCATCTCTGCTGCCCTCCACTACTCCCTCTCACACCTGGAAACCAAAGACTCCTACATtaggatgctctttgtggactacaGCTCTGCCTTCAACACGGTCATCCCCCACAAACTCACCCACAAGCTGTCCACACTCAGCTTGCACccctccctctgcaactggctCCTGGATTTCCTCACTGGCAGGCCCCAGTCTGTAAGGATTGGCAACAGGACTTCAGCCAGCATCACCACCTACACCGGCACCCCACAGGGATGTGTCCTCAGCCCCATCCTTTACACACTGTTTACCCACGACTGTGTCGCCTCAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU151548 True 483 TUCP 0.56 1 19224602 19225084

Neighbor

gene id symbol gene type direction distance location
tgfbrap1 tgfbrap1,LOC107596311,LOC107738304,LOC107688833,LOC107748533,LOC107660108 coding downstream 40213 19151478 ~ 19184389 (-)
LOC103041993 inpp4ab,LOC108437834,LOC108273053,LOC107566790 coding downstream 870088 18288510 ~ 18354514 (-)
LOC103041078 cacnb4b,LOC108437833,LOC108272385,LOC107566792,LOC107688838,LOC107748538,LOC107705621,LOC107660102,LOC107596307 coding downstream 942324 18232082 ~ 18282278 (-)
LOC103040586 LOC108437832 coding downstream 1015612 18191678 ~ 18208990 (-)
LOC103040268 LOC108437831,LOC108272774,LOC107596329,LOC107660144,LOC107705618 coding downstream 1040615 18173975 ~ 18183987 (-)
psmd12 psmd12 coding upstream 134260 19359344 ~ 19366934 (-)
micall1 micall1,LOC107716893,LOC107569466,LOC107710163,LOC107694909 coding upstream 183652 19408736 ~ 19446161 (-)
LOC103028781 LOC103028781,LOC108424728 coding upstream 264694 19489778 ~ 19496459 (-)
LOC103027619 NA coding upstream 317186 19542270 ~ 19546674 (-)
LOC103022889 LOC108424738 coding upstream 492485 19717569 ~ 19723342 (-)
G112107 NA non-coding downstream 88369 19135119 ~ 19136233 (-)
G112100 NA non-coding downstream 92844 19113071 ~ 19131758 (-)
G112085 NA non-coding downstream 121684 19062090 ~ 19102918 (-)
LOC111193739 NA non-coding downstream 141817 19070606 ~ 19082785 (-)
G112093 NA non-coding downstream 154651 19068885 ~ 19069951 (-)
G112126 NA non-coding upstream 14973 19240057 ~ 19240272 (-)
G112128 NA non-coding upstream 20142 19245226 ~ 19250262 (-)
G112184 NA non-coding upstream 89320 19314404 ~ 19336052 (-)
G112185 NA non-coding upstream 95852 19320936 ~ 19333464 (-)
G112186 NA non-coding upstream 126403 19351487 ~ 19351736 (-)
G112029 NA other downstream 591742 18632201 ~ 18632860 (-)
G111970 dnpep,LOC106575848 other downstream 1120144 18103829 ~ 18104458 (-)
G111763 NA other downstream 1700216 17523646 ~ 17524386 (-)
G111664 NA other downstream 2457297 16764687 ~ 16767305 (-)
G110969 NA other downstream 5363527 13860585 ~ 13861075 (-)
LOC103029406 LOC556764,LOC108424762,LOC105913225 other upstream 241469 19466553 ~ 19479907 (-)
LOC103026630 LOC103026630,LOC108424735,LOC105910165,LOC105910166,LOC107705921,LOC107568399,LOC107676721 other upstream 362950 19588034 ~ 19636446 (-)
G112280 NA other upstream 507520 19732604 ~ 19733373 (-)
zglp1 NA other upstream 609324 19834408 ~ 19842292 (-)
LOC103032158 LOC108424749,LOC108273301 other upstream 831087 20056171 ~ 20094326 (-)

Expression


Co-expression Network