G112280


Basic Information

Item Value
gene id G112280
gene name NA
gene type unknown
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035909.1
NCBI id CM008312.1
chromosome length 44161018
location 19732604 ~ 19733373 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU151769
ACTGGTACTTTTCTTTGTTCCTTTGCTGCTATGTCTCCGCTCCCTATCTTTGtccttcttcttcttgcttTTCTTACTCTTTTTGCTCTTCTTGTTATGTGAAGCTAATGAGTCGTCGATGACCAGCTGTCCATTATCTGTGTCATCTGCTGAAGAAGAGCTGTCATCGTCCATAAACTCATAGGATCCCCCATAATGACCTTCCAGCTCCACTTCTTCTCCAACCACAGGCAGCGCCTCACGCAcaatgtgctgctgctgctggggttGCCGTTGCTGCTGCGGAGATTGCCGTTGCGGAGGTTGCCGCTGCGGCTGCAGTTGTCGTTGCTGCTGTGGAGGTTGCCGCTGCGGCTGCTGCGGTTGCCTCTGCTGTTGCTGATGTGGTGGTGGGGTTTTCTTGGTGGGCTTGGAGATCCCCAggctgtctctctttttttcctttgccAAGTGGTGTTGAGAGGGGTACAAGGGCTTCTTGGGGAAAGAGGGGCTGGGCTCTGAGCCCACAGCTGTGGGAGAGGTGATGGCTTGGAGAAGGCCCATGGCAGTCATTGCAGTGTGTGAGGAGTTGGAGGAGGACATGGAGGCACCATGGCTCTCCGAtggtttcttcttctttttgtgGTGCGACCCAGAAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU151769 True 641 TUCP 0.54 3 19732604 19733373

Neighbor

gene id symbol gene type direction distance location
LOC103022889 LOC108424738 coding downstream 9262 19717569 ~ 19723342 (-)
LOC103027619 NA coding downstream 185930 19542270 ~ 19546674 (-)
LOC103028781 LOC103028781,LOC108424728 coding downstream 236145 19489778 ~ 19496459 (-)
micall1 micall1,LOC107716893,LOC107569466,LOC107710163,LOC107694909 coding downstream 286443 19408736 ~ 19446161 (-)
psmd12 psmd12 coding downstream 365670 19359344 ~ 19366934 (-)
LOC103047713 LOC108424741 coding upstream 38563 19771936 ~ 19785629 (-)
LOC103032470 LOC105013178,LOC103022087,LOC100712378,LOC107596217 coding upstream 97989 19831362 ~ 19833885 (-)
fdx1l fdx1l coding upstream 110152 19843525 ~ 19849310 (-)
cdkn2d cdkn2d coding upstream 259252 19992625 ~ 19996278 (-)
ap1m2 ap1m2 coding upstream 264248 19997621 ~ 20008668 (-)
G112265 NA non-coding downstream 21412 19605473 ~ 19711192 (-)
G112259 NA non-coding downstream 100187 19627374 ~ 19632417 (-)
G112216 NA non-coding downstream 231016 19498103 ~ 19501588 (-)
G112188 ppp1r12c non-coding downstream 345197 19381283 ~ 19387407 (-)
G112186 NA non-coding downstream 380868 19351487 ~ 19351736 (-)
G112281 LOC108424739 non-coding upstream 2954 19736327 ~ 19737230 (-)
G112390 keap1 non-coding upstream 222667 19956040 ~ 19959463 (-)
G112407 NA non-coding upstream 287463 20020836 ~ 20036804 (-)
LOC107196873 NA non-coding upstream 393946 20127319 ~ 20225184 (-)
G112431 NA non-coding upstream 432350 20165723 ~ 20166932 (-)
LOC103026630 LOC103026630,LOC108424735,LOC105910165,LOC105910166,LOC107705921,LOC107568399,LOC107676721 other downstream 96158 19588034 ~ 19636446 (-)
LOC103029406 LOC556764,LOC108424762,LOC105913225 other downstream 252697 19466553 ~ 19479907 (-)
G112125 NA other downstream 507520 19224602 ~ 19225084 (-)
G112029 NA other downstream 1099744 18632201 ~ 18632860 (-)
G111970 dnpep,LOC106575848 other downstream 1628146 18103829 ~ 18104458 (-)
zglp1 NA other upstream 101035 19834408 ~ 19842292 (-)
LOC103032158 LOC108424749,LOC108273301 other upstream 322798 20056171 ~ 20094326 (-)
trnae-uuc_17 NA other upstream 362567 20095940 ~ 20096011 (-)
G112507 NA other upstream 538627 20272000 ~ 20317337 (-)
syngr1 syngr1 other upstream 725385 20458758 ~ 20555427 (-)

Expression


Co-expression Network