G112184


Basic Information

Item Value
gene id G112184
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035909.1
NCBI id CM008312.1
chromosome length 44161018
location 19314404 ~ 19336052 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU151634
GTTTCATCTTCGTATTTCAAAAATTGCGACGTCCACGGGCGTGCAAAGTTctgcccattcattttcaatgggcaaaaaaaacgcgtacttacgaagtttttacgaaaaacgtaagtccgatcggaaagctgtatacaagcccaCCATTCCCGATATGGACGCacgttttctcttttgaacGAAGTCGATATTTCGAAAACTGCGGCACTAGTTAACCGgacaaaaaacaggtggaataataataataataataataataataa
>TU151636
ttcattttcaatgggcaaaaaaacgcgtacttacgaagtttttacgaaaaacgtaagtccgatcggaaagctgtatacaagcccaCCATTCCCGATATGGACGCacgttttctcttttgaacGAAGTCGATATTTCGAAAACTGCGGCACTAGTTAACCGgacaaaaaacaggtggaataataataataataagaagaagaataagacttaagaagaacaatactgtgattgcattactgcaatcacactaataa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU151634 True 263 lncRNA 0.38 2 19320288 19336052
TU151636 False 255 lncRNA 0.36 2 19314404 19320492

Neighbor

gene id symbol gene type direction distance location
tgfbrap1 tgfbrap1,LOC107596311,LOC107738304,LOC107688833,LOC107748533,LOC107660108 coding downstream 130015 19151478 ~ 19184389 (-)
LOC103041993 inpp4ab,LOC108437834,LOC108273053,LOC107566790 coding downstream 959890 18288510 ~ 18354514 (-)
LOC103041078 cacnb4b,LOC108437833,LOC108272385,LOC107566792,LOC107688838,LOC107748538,LOC107705621,LOC107660102,LOC107596307 coding downstream 1032126 18232082 ~ 18282278 (-)
LOC103040586 LOC108437832 coding downstream 1105414 18191678 ~ 18208990 (-)
LOC103040268 LOC108437831,LOC108272774,LOC107596329,LOC107660144,LOC107705618 coding downstream 1130417 18173975 ~ 18183987 (-)
psmd12 psmd12 coding upstream 23292 19359344 ~ 19366934 (-)
micall1 micall1,LOC107716893,LOC107569466,LOC107710163,LOC107694909 coding upstream 72684 19408736 ~ 19446161 (-)
LOC103028781 LOC103028781,LOC108424728 coding upstream 153726 19489778 ~ 19496459 (-)
LOC103027619 NA coding upstream 206218 19542270 ~ 19546674 (-)
LOC103022889 LOC108424738 coding upstream 381517 19717569 ~ 19723342 (-)
G112128 NA non-coding downstream 64142 19245226 ~ 19250262 (-)
G112126 NA non-coding downstream 74132 19240057 ~ 19240272 (-)
G112107 NA non-coding downstream 178171 19135119 ~ 19136233 (-)
G112100 NA non-coding downstream 182646 19113071 ~ 19131758 (-)
LOC111193739 NA non-coding downstream 231619 19070606 ~ 19082785 (-)
G112186 NA non-coding upstream 15435 19351487 ~ 19351736 (-)
G112188 ppp1r12c non-coding upstream 45231 19381283 ~ 19387407 (-)
G112216 NA non-coding upstream 162051 19498103 ~ 19501588 (-)
G112265 NA non-coding upstream 269421 19605473 ~ 19711192 (-)
G112259 NA non-coding upstream 291322 19627374 ~ 19632417 (-)
G112125 NA other downstream 89320 19224602 ~ 19225084 (-)
G112029 NA other downstream 681544 18632201 ~ 18632860 (-)
G111970 dnpep,LOC106575848 other downstream 1209946 18103829 ~ 18104458 (-)
G111763 NA other downstream 1790018 17523646 ~ 17524386 (-)
G111664 NA other downstream 2547099 16764687 ~ 16767305 (-)
LOC103029406 LOC556764,LOC108424762,LOC105913225 other upstream 130501 19466553 ~ 19479907 (-)
LOC103026630 LOC103026630,LOC108424735,LOC105910165,LOC105910166,LOC107705921,LOC107568399,LOC107676721 other upstream 251982 19588034 ~ 19636446 (-)
G112280 NA other upstream 396552 19732604 ~ 19733373 (-)
zglp1 NA other upstream 498356 19834408 ~ 19842292 (-)
LOC103032158 LOC108424749,LOC108273301 other upstream 720119 20056171 ~ 20094326 (-)

Expression


Co-expression Network