G111795


Basic Information

Item Value
gene id G111795
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035909.1
NCBI id CM008312.1
chromosome length 44161018
location 17641823 ~ 17642203 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU151100
AAAGTTCTCGTCGACGAAGTTGCCTGCTGCTCCCGAGTCCAGGAGGGCTGTGGAAAAAACAGACCCCAGGTAGTGAACTGAAATAGGGACTGTAAAAGACttcagagagagagtatgaggaGGAACACTTACCCCGCTGCTTGCTGGTGTGGTCTCACGGGGTGCTCCTCGTACGGGGCGTGTAACACACTCTCTGACCAAATGACCGGGATCGCCGCAGTACATGCAAAGGCCCATCTGTCTGCGTCGGTTTCTTTCCTGGCTTGACAGGCGGGTGGTTCCCAGTTGCATGGGTTCAGCCAGAGGTTCCAGGTGGGGCAGGGGAATACGGCGGCGCTCTCTTAGCAGATTGTCCAATCTAATGGCCATGCTGATTACCTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU151100 True 381 lncRNA 0.55 1 17641823 17642203

Neighbor

gene id symbol gene type direction distance location
LOC103040564 LOC108443440,LOC108273224 coding downstream 89484 17514809 ~ 17552339 (-)
tbc1d23 tbc1d23,LOC107574489,LOC107752629 coding downstream 143300 17471835 ~ 17498523 (-)
bcl6 bcl6,LOC107752633 coding downstream 921699 16668516 ~ 16720124 (-)
trnap-cgg_2 NA coding downstream 1258526 16383226 ~ 16383297 (-)
trnap-ugg_4 NA coding downstream 1258985 16382767 ~ 16382838 (-)
chpf chpf coding upstream 247046 17889249 ~ 17910481 (-)
LOC103043861 LOC108437841,LOC107566327,LOC107705612,LOC107748546,LOC107566796,LOC107688845 coding upstream 349201 17991404 ~ 17999869 (-)
LOC103039642 des,desmb,LOC108437828,LOC107660100,LOC107705613,LOC107566324,LOC107566784 coding upstream 437155 18079358 ~ 18092036 (-)
LOC103040268 LOC108437831,LOC108272774,LOC107596329,LOC107660144,LOC107705618 coding upstream 531772 18173975 ~ 18183987 (-)
LOC103040586 LOC108437832 coding upstream 549475 18191678 ~ 18208990 (-)
G111793 NA non-coding downstream 564 17641059 ~ 17641259 (-)
G111790 NA non-coding downstream 12319 17629245 ~ 17629504 (-)
G111783 NA non-coding downstream 45256 17595918 ~ 17596567 (-)
G111773 NA non-coding downstream 76870 17558307 ~ 17564953 (-)
G111774 NA non-coding downstream 77801 17560320 ~ 17564022 (-)
G111797 NA non-coding upstream 147 17642350 ~ 17642792 (-)
G111799 NA non-coding upstream 689 17642892 ~ 17643172 (-)
G111802 NA non-coding upstream 2064 17644267 ~ 17644476 (-)
G111806 NA non-coding upstream 28954 17671157 ~ 17671413 (-)
G111813 NA non-coding upstream 36624 17678827 ~ 17679297 (-)
G111763 NA other downstream 117437 17523646 ~ 17524386 (-)
G111664 NA other downstream 874518 16764687 ~ 16767305 (-)
G110969 NA other downstream 3780748 13860585 ~ 13861075 (-)
LOC103038496 gbg12,LOC103038496,LOC108271932,LOC105895117,LOC107705318,LOC107555383,LOC107564436,LOC108437694,LOC107678346 other downstream 4587951 12930798 ~ 13053872 (-)
LOC103045540 LOC108430857 other downstream 6663734 10949959 ~ 10978089 (-)
G111970 dnpep,LOC106575848 other upstream 461626 18103829 ~ 18104458 (-)
G112029 NA other upstream 989998 18632201 ~ 18632860 (-)
G112125 NA other upstream 1582399 19224602 ~ 19225084 (-)
LOC103029406 LOC556764,LOC108424762,LOC105913225 other upstream 1824350 19466553 ~ 19479907 (-)
LOC103026630 LOC103026630,LOC108424735,LOC105910165,LOC105910166,LOC107705921,LOC107568399,LOC107676721 other upstream 1945831 19588034 ~ 19636446 (-)

Expression


Co-expression Network