CI01000010_06154873_06157770


Basic Information

Item Value
gene id CI01000010_06154873_06157770
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000010
NCBI id null
chromosome length 12265998
location 6154873 ~ 6158518 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000010_06154873_06157770.mRNA
GTGGCTAAGAGTTTGTTGTTTCTGATTAAGCAGGTGCCCAGCTGGCGAAGTGTGTGCGTCCTCTGCTCCCTATACTGCGTCCTGATTCTGCCAGACGCCGGAGAAGCGGCAAAAGCACGCTGTGGACGGGAACTAGTCGCTGACCTGGAGTTTGTGTGTGGAGACCGTGGCTTTTACAGAGGCAAACCTGGAGCAGCCCGTAACGGCGGTCCTCGCTCTCGTGGGAAAGGGATCGTCGAGCAGTGTTGTGTGCGGGGATGTGACCTCCAGCATTTGGAGTCGTATTGTGCCAAACCCAAGAGGGTGCGCCGTGACGTCCCTGTATCTCTGCAGCAGACTGTGGAAGATCAGTTTTGGCTGGTGTTTCAGCAGCGATACCAGAAGCTTGCAGAGATGAAGAGAGATGAGAAAGCTGCATCTCATAGACTCAGAGAGCGGACGCTCTACCGGTGGAACAGAGTTTCAGTATTACTAAACACCAACACACCCAACCGACCCCCTTCAACACACCAACATCCTGCCACTGGGAGAATGACATCAAGACCAACATTTATCTCCCACATCCGATAGTCATGGCTCTATTTGGATCTGCGTGGACTCTATGAATCATCTTCCTTTTCTAAGAAAGACTTTTCCGTCCTTGCAGAAGTATAAACTGAGGACTCTTTAAGAAAAACTAGAAGACAAGATGCCATGAAAGTGAAGAGTGTGTGTGTACCTGAAAATGGGTTGTACTAGTTTCACATATGTCGAATACAACATGAATTGTATTTTTCCATTTTGTTTTCAGCTTCCCTCCTAGCATTGACTTCTGTGTTTGGGTAAATGGGTTCAAAGCAAATTGAGGGTGGCAGTTGAAAGTGTTTGTATGTTACTCTTATAGACTTGAAAGACTCAATATGGGAACACTGACGGCTTAAGTAAGTCATTTTGAATGTAAATGTGACAAATGTGTTTTTATAAAAGATTACTGATATCAGTGAATATATTTTCTTAAACGTTTTTTTATGTTTAATTTATGGTCTGTATATTTCTGTATGATTAGGTTTTTCTAATACCTGTGAAATATCCAAATCAAAGCAGATTTGGAAAGAAAATTTAAATTAAAAAAATGTGAGGACATGCTTTTCATTTTATGGCAATATTTTATATTTTTCCAACACCCTAATCAGCTCCAGTTTAAACGATGCAGACAGATTCCAGATCTTATAGTGAGAGCTGTAGGATCCTGAAAGCTGTGTGTTTCTAAGGTTCTTTTGGATCATTAGATATCATCCCAGTGACCTCTAAGGCAAGAACATTAGTCTGTTTACGGTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000010_06154873_06157770.mRNA True 1318 mRNA 0.43 3 6154873 6158518

Neighbor

gene id symbol gene type direction distance location
CI01000010_06146390_06152584 NA coding upstream 2138 6146309 ~ 6152735 (+)
CI01000010_06116623_06143372 ATP2B3B, ATP2B3, ATP2B3A coding upstream 10811 6116524 ~ 6144062 (+)
CI01000010_06102935_06103344 DEDD coding upstream 51270 6102857 ~ 6103603 (+)
CI01000010_06093805_06101291 NA coding upstream 53582 6093805 ~ 6101358 (+)
CI01000010_06080203_06081963 RHOA.S, RHOCB, RHOC, RHOA, RHOAC, RHOAA coding upstream 72594 6080203 ~ 6082279 (+)
CI01000010_06166731_06172965 NA coding downstream 8213 6166731 ~ 6173143 (+)
CI01000010_06242353_06250653 CABP4 coding downstream 83835 6242353 ~ 6251322 (+)
CI01000010_06285808_06296322 B3GNT3 coding downstream 127290 6285808 ~ 6296474 (+)
CI01000010_06303382_06311970 NA coding downstream 144383 6302901 ~ 6312278 (+)
CI01000010_06324209_06332002 NA coding downstream 165691 6324209 ~ 6333126 (+)
G63333 NA non-coding upstream 65696 6088239 ~ 6089177 (+)
G63443 NA non-coding upstream 271222 5882768 ~ 5883651 (+)
G63442 NA non-coding upstream 273273 5881195 ~ 5881600 (+)
G63497 NA non-coding downstream 1114 6159632 ~ 6159848 (+)
G63502 NA non-coding downstream 23827 6182345 ~ 6182679 (+)
G63503 NA non-coding downstream 24321 6182839 ~ 6183069 (+)
G63504 NA non-coding downstream 25161 6183679 ~ 6183908 (+)
G63505 NA non-coding downstream 25884 6184402 ~ 6184611 (+)
CI01000010_05789479_05790006 NA other upstream 364886 5788332 ~ 5790204 (+)
G63405 NA other upstream 437623 5707971 ~ 5717250 (+)
G63403 NA other upstream 447788 5695445 ~ 5707085 (+)
CI01000010_04640858_04683752 OSBPL9 other upstream 1500880 4640516 ~ 4683778 (+)
G62983 NA other upstream 1705546 4448172 ~ 4449327 (+)
G63524 NA other downstream 216040 6374558 ~ 6374667 (+)
G63572 NA other downstream 427410 6585928 ~ 6617806 (+)
G65803 NA other downstream 2874029 9032547 ~ 9038005 (+)
G65875 NA other downstream 2968792 9127310 ~ 9132112 (+)
G66014 NA other downstream 3360066 9518584 ~ 9519262 (+)

Expression


Co-expression Network