Gene
RNA
| Item | Value |
|---|---|
| gene id | G63333 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000010 |
| NCBI id | null |
| chromosome length | 12265998 |
| location | 6088239 ~ 6089177 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU72134 | True | 535 | lncRNA | 0.45 | 2 | 6088239 | 6089177 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000010_06080203_06081963 | RHOA.S, RHOCB, RHOC, RHOA, RHOAC, RHOAA | coding | upstream | 5960 | 6080203 ~ 6082279 (+) |
| CI01000010_06074779_06076207 | NDUFB11 | coding | upstream | 11959 | 6074427 ~ 6076280 (+) |
| CI01000010_06062478_06073546 | DEF6, DEF6A | coding | upstream | 14447 | 6062478 ~ 6073792 (+) |
| CI01000010_06043120_06058750 | SIN3B | coding | upstream | 29416 | 6043120 ~ 6058823 (+) |
| CI01000010_06014142_06037829 | XPR1A | coding | upstream | 49789 | 6014142 ~ 6038450 (+) |
| CI01000010_06093805_06101291 | NA | coding | downstream | 4628 | 6093805 ~ 6101358 (+) |
| CI01000010_06102935_06103344 | DEDD | coding | downstream | 13758 | 6102857 ~ 6103603 (+) |
| CI01000010_06116623_06143372 | ATP2B3B, ATP2B3, ATP2B3A | coding | downstream | 27347 | 6116524 ~ 6144062 (+) |
| CI01000010_06146390_06152584 | NA | coding | downstream | 57132 | 6146309 ~ 6152735 (+) |
| CI01000010_06154873_06157770 | NA | coding | downstream | 65696 | 6154873 ~ 6158518 (+) |
| G63443 | NA | non-coding | upstream | 204588 | 5882768 ~ 5883651 (+) |
| G63442 | NA | non-coding | upstream | 206639 | 5881195 ~ 5881600 (+) |
| G63405 | NA | non-coding | upstream | 370989 | 5707971 ~ 5717250 (+) |
| G63403 | NA | non-coding | upstream | 389774 | 5695445 ~ 5707085 (+) |
| G63399 | NA | non-coding | upstream | 394231 | 5691435 ~ 5694008 (+) |
| G63497 | NA | non-coding | downstream | 70455 | 6159632 ~ 6159848 (+) |
| G63502 | NA | non-coding | downstream | 93168 | 6182345 ~ 6182679 (+) |
| G63503 | NA | non-coding | downstream | 93662 | 6182839 ~ 6183069 (+) |
| CI01000010_05789479_05790006 | NA | other | upstream | 298252 | 5788332 ~ 5790204 (+) |
| CI01000010_04640858_04683752 | OSBPL9 | other | upstream | 1434246 | 4640516 ~ 4683778 (+) |
| G62983 | NA | other | upstream | 1638912 | 4448172 ~ 4449327 (+) |
| G63524 | NA | other | downstream | 285381 | 6374558 ~ 6374667 (+) |
| G63572 | NA | other | downstream | 496751 | 6585928 ~ 6617806 (+) |
| G65803 | NA | other | downstream | 2943370 | 9032547 ~ 9038005 (+) |
| G65875 | NA | other | downstream | 3038133 | 9127310 ~ 9132112 (+) |
| G66014 | NA | other | downstream | 3429407 | 9518584 ~ 9519262 (+) |
