ndufa4l2 (ndufa4l2,LOC107385343)


Basic Information

Item Value
gene id ndufa4l2
gene name ndufa4l2,LOC107385343
gene type misc
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035909.1
NCBI id CM008312.1
chromosome length 44161018
location 29147436 ~ 29162803 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU154741
TTTTATGGCCTCATCACctcattttggtgtgtttagagtgtttACTGTGATTTAAAGAAAGTGTTGAGTAGGTAGCATTTAATTTTCTTTCAGCTGGTTCTGCTTTTTCAAGCTCATGATGCTGAAACGAATTTTTCAGCAAGCAAAGAAGCATCCAGGACTCATCccccagttttttttcatggtttTGGGTATGAGTGGAGCCTCCCTCTACCTGATCCGACTGGCACGAGGACCTCATGTGAGTTGGTGGCCGTCACTACAGACTACAAGAAGCTGAAGAAGGAAGGACCTGACTTTTAAAGGTCCTCTCTGTGACTCCGAGGGCACAtccaaacacgcacacacactcacacacactcacactgctgTGGTATCACTTACCGTCTCAGATGTGTGTCGTTGTGAACCTTTACGTAAGACAACAGCAACCTCAACCCTCTCCCATCCATATTGTCTTCCAGAGAGCAGAAAGCTTTTAGAATATTAAAGTCATATTTCCACGACAGCAGAGGCATGTTCAGCATGCCACACGCACTTAGAGAACGCATGCGTAAAATCCTAGCTCAAGGATATTTCTCAAAGAACAAATAAAGACAATTTCCATGCTTAGAAGTTTGCGTAGGGTCGTATATTATCCACAAAAgagaaatacaaaataacattactgcATGCTATGATAAAGTGCTGTTTACTAGTATAaagaacaacaacagcagccaTCCCCTGCAACATGAAGAAACATGACGAAATCACGAAAGTGTTTAAGAGTGCACAACAATTACGACTGAAGATTTTTCTATTGACAGTATTCTAGAAATCTATAAgtcaaattttaataaaatgtaatttaaagaaGCACTTTATTCTAGGGGTGAGCCGACATGATACTCCGTATCGGTATCAGTCTGATATTGGCCAAAATCACATGAGCGAAAATTGCAAGAAAAAAGTCATCTGTTAATCCAATATGATCCATTAGTCTATCCCATAATTGCTTAACCCTAGATGttgatgtgtttatgtgtttaatcCAGGCTACATgccagtatttatttataaatatttattaaacactgaaAATCTTTAACATTACAGCAGAAATACCAACAACGCACAATACTGTTTCATTTTGTAAGTGTGAGTTCATGTAGTTTAGTTGTGGTGGTTCTACTGGTGGTGTGTTATGCATTCTCCTAATCCTTTATTGCTTGAATTACATTTTTGGGaggaaaaatatactttttggaAGTTTAGAAATCCATGTGGatatattaaacatacagtTCATTTTTATGCTAACTTTTAATAACAAGctgatcagttttttaagcaagaAATCACCTAAAACTTGCAGGGCAGGTCTCTAGAACCATATATGAGAACCCTTGATTCATTATGATTAATCTGACAAACATGGTTTAGCTGCATAATGTTTCTCAAAAGgcaacaaatatatatactgtgtataaaaatctgttttagtAAATTATAACAAGAAAGTATGAAAACAGTAAGAATCTGTTGGGTTCTAGGGTGGATTAAGGCCTCCATCAGTTATGA
>XM_007253392.3
gttctctATTTTGGAGAGGCAAGCAACATAGTAGTCAGACAGTGTCGACATTTTATGGCCTCATCACctcattttggtgtgtttagagtgtttACTGTGATTTAAAGAAAGTGTTGAGTAGGTAGCATTTAATTTTCTTTCAGCTGGTTCTGCTTTTTCAAGCTCATGATGCTGAAACGAATTTTTCAGCAAGCAAAGAAGCATCCAGGACTCATCccccagttttttttcatggtttTGGGTATGAGTGGAGCCTCCCTCTACCTGATCCGACTGGCACGAGGACCTCATGTGAGCTGGGACAGGAAGAATAACCCAGAGCCATGGAACAAACTCAGTCCCACCTATCAGTACAAGTTGGTGGCCGTCACTACAGACTACAAGAAGCTGAAGAAGGAAGGACCTGACTTTTAAAGGTCCTCTCTGTGACTCCGAGGGCACAtccaaacacgcacacacactcacacacactcacactgctgTGGTATCACTTACCGTCTCAGATGTGTGTCGTTGTGAACCTTTACGTAAGACAACAGCAACCTCAACCCTCTCCCATCCATATTGTCTTCCAGAGAGCAGAAAGCTTTTAGAATATTAAAGTCATATTTCCACGACAGCAGAGGCATGTTCAGCATGCCACACGCACTTAGAGAACGCATGCGTAAAATCCTAGCTCAAGGATATTTCTCAAAGAACAAATAAAGACAATTTCCATGCTTAGAAGTTTGCGTAGGGTCGTATATTATCCACAAAAgagaaatacaaaataacattactgcATGCTATGATAAAGTGCTGTTTACTAGTATAaagaacaacaacagcagccaTCCCCTGCAACATGAAGAAACATGACGAAATCACGAAAGTGTTTAAGAGTGCACAACAATTACGACTGAAGATTTTTCTATTGACAGTATTCTAGAAATCTATAAgtcaaattttaataaaatgtaatttaaagaaGCACTTTATTCTAGGGGTGAGCCGACATGATACTCCGTATCGGTATCAGTCTGATATTGGCCAAAATCACATGAGCGAAAATTGCAAGAAAAAAGTCATCTGTTAATCCAATATGATCCATTAGTCTATCCCATAATTGCTTAACCCTAGATGttgatgtgtttatgtgtttaatcCAGGCTACATgccagtatttatttataaatatttattaaacactgaaAATCTTTAACATTACAGCAGAAATACCAACAACGCACAATACTGTTTCATTTTGTAAGTGTGAGTTCATGTAGTTTAGTTGTGGTGGTTCTACTGGTGGTGTGTTATGCATTCTCCTAATCCTTTATTGCTTGAATTACATTTTTGGGaggaaaaatatactttttggaAGTTTAGAAATCCATGTGGatatattaaacatacagtTCATTTTTATGCTAACTTTTAATAACAAGctgatcagttttttaagcaagaAATCACCTAAAACTTGCAGGGCAGGTCTCTAGAACCATATATGAGAACCCTTGATTCATTATGATTAATCTGACAAACATGGTTTAGCTGCATAATGTTTCTCAAAAGgcaacaaatatatatactgtgtataaaaatctgttttagtAAATTATAACAAGAAAGTATGAAAACAGTAAGAATCTGTTGGGTTCTAGGGTGGATTAAGGCCTCCATCAGTTATGAGAGAACCACTGTttgttctttcactctctttcctgttctaaataaagttttaaaataaattaaa

Function

symbol description
ndufa4l2 Predicted to be integral component of membrane. Predicted to be part of mitochondrial respiratory chain complex IV.

NR:

description
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 4-like 2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU154741 False 1563 lncRNA 0.37 3 29147500 29162753
XM_007253392.3 True 1738 mRNA 0.37 4 29147436 29162803

Neighbor

gene id symbol gene type direction distance location
LOC103021438 LOC108431803,LOC107575493 coding downstream 388289 28754098 ~ 28759147 (-)
gli1 gli1,LOC107683616 coding downstream 431250 28653001 ~ 28716186 (-)
LOC103034067 NA coding downstream 501026 28596942 ~ 28646410 (-)
mars mars coding downstream 631850 28492506 ~ 28515586 (-)
mbd6 LOC108431819,LOC107558151 coding downstream 674046 28454072 ~ 28473390 (-)
rbm19 NA coding upstream 35070 29197873 ~ 29213345 (-)
LOC103046288 LOC108427555,LOC108271798,LOC107680717,LOC107667034,LOC107555973 coding upstream 53533 29216336 ~ 29231900 (-)
LOC103044340 ptprg,LOC108427534,LOC107592848 coding upstream 129458 29292261 ~ 29457665 (-)
LOC103032473 camk1a,LOC108427562,LOC108271991,LOC107708108,LOC107680695,LOC107713533,LOC107667041 coding upstream 476315 29639118 ~ 29681400 (-)
LOC103042196 kcnb1,LOC107667042,LOC107713536,LOC107680683,LOC108272148,LOC107555957 coding upstream 568944 29731747 ~ 29794085 (-)
LOC111193759 NA non-coding downstream 5756 29129428 ~ 29141680 (-)
G114407 NA non-coding downstream 169983 28976832 ~ 28977453 (-)
G114401 NA non-coding downstream 215840 28931350 ~ 28931596 (-)
G114380 NA non-coding downstream 299224 28847959 ~ 28848212 (-)
G114359 r3hdm2 non-coding downstream 317673 28816230 ~ 28829763 (-)
G114499 NA non-coding upstream 22815 29185618 ~ 29194645 (-)
LOC111193760 NA non-coding upstream 95341 29258144 ~ 29263011 (-)
LOC111193692 NA non-coding upstream 100748 29263551 ~ 29264325 (-)
G114509 NA non-coding upstream 161257 29324060 ~ 29324914 (-)
G114510 NA non-coding upstream 164974 29327777 ~ 29328215 (-)
G114304 NA other downstream 562477 28583393 ~ 28584959 (-)
G114270 NA other downstream 785955 28348265 ~ 28361481 (-)
G114134 kcnq2,LOC107758168,LOC107665991,LOC107558155 other downstream 1017580 28125236 ~ 28129856 (-)
G113888 NA other downstream 2754239 26346140 ~ 26393197 (-)
G113826 NA other downstream 3085152 26032895 ~ 26062284 (-)
LOC103044966 tardbp,LOC108427558,LOC107666995,LOC107713527,LOC107555974 other upstream 116013 29278816 ~ 29284782 (-)
G114514 NA other upstream 312043 29474846 ~ 29475567 (-)
G114628 NA other upstream 676456 29839259 ~ 29839768 (-)
LOC111193670 NA other upstream 797581 29960384 ~ 29964703 (-)
LOC103030897 grm4,LOC108427575,LOC108272196,LOC107708172,LOC107549321,LOC107569297,LOC107716363 other upstream 1071560 30234363 ~ 30601322 (-)

Expression


Co-expression Network