G114499


Basic Information

Item Value
gene id G114499
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035909.1
NCBI id CM008312.1
chromosome length 44161018
location 29185618 ~ 29194645 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU154743
caaagctcttacaatcgcctacaaggtgatgacagaacaggctccttcctacctgcactcgctcctgaaggcttacgctacctcccggccgctgcgctcctccaatgaacgtcgcctcgctttgccaaacattcacacaaagcaatccagactgttctcatacagagttccccaatggtgtaacaaactaccttctactaccagatcaggagaatctctcgctatctttaagaaactcctgaagacagagctcttcaaagagcacttactct

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU154743 True 272 lncRNA 0.49 2 29185618 29194645

Neighbor

gene id symbol gene type direction distance location
LOC103021438 LOC108431803,LOC107575493 coding downstream 426471 28754098 ~ 28759147 (-)
gli1 gli1,LOC107683616 coding downstream 469432 28653001 ~ 28716186 (-)
LOC103034067 NA coding downstream 539208 28596942 ~ 28646410 (-)
mars mars coding downstream 670032 28492506 ~ 28515586 (-)
mbd6 LOC108431819,LOC107558151 coding downstream 712228 28454072 ~ 28473390 (-)
rbm19 NA coding upstream 3228 29197873 ~ 29213345 (-)
LOC103046288 LOC108427555,LOC108271798,LOC107680717,LOC107667034,LOC107555973 coding upstream 21691 29216336 ~ 29231900 (-)
LOC103044340 ptprg,LOC108427534,LOC107592848 coding upstream 97616 29292261 ~ 29457665 (-)
LOC103032473 camk1a,LOC108427562,LOC108271991,LOC107708108,LOC107680695,LOC107713533,LOC107667041 coding upstream 444473 29639118 ~ 29681400 (-)
LOC103042196 kcnb1,LOC107667042,LOC107713536,LOC107680683,LOC108272148,LOC107555957 coding upstream 537102 29731747 ~ 29794085 (-)
LOC111193759 NA non-coding downstream 43938 29129428 ~ 29141680 (-)
G114407 NA non-coding downstream 208165 28976832 ~ 28977453 (-)
G114401 NA non-coding downstream 254022 28931350 ~ 28931596 (-)
G114380 NA non-coding downstream 337406 28847959 ~ 28848212 (-)
G114359 r3hdm2 non-coding downstream 355855 28816230 ~ 28829763 (-)
LOC111193760 NA non-coding upstream 63499 29258144 ~ 29263011 (-)
LOC111193692 NA non-coding upstream 68906 29263551 ~ 29264325 (-)
G114509 NA non-coding upstream 129415 29324060 ~ 29324914 (-)
G114510 NA non-coding upstream 133132 29327777 ~ 29328215 (-)
G114550 NA non-coding upstream 423090 29617735 ~ 29619060 (-)
ndufa4l2 ndufa4l2,LOC107385343 other downstream 22815 29147436 ~ 29162803 (-)
G114304 NA other downstream 600659 28583393 ~ 28584959 (-)
G114270 NA other downstream 824137 28348265 ~ 28361481 (-)
G114134 kcnq2,LOC107758168,LOC107665991,LOC107558155 other downstream 1055762 28125236 ~ 28129856 (-)
G113888 NA other downstream 2792421 26346140 ~ 26393197 (-)
LOC103044966 tardbp,LOC108427558,LOC107666995,LOC107713527,LOC107555974 other upstream 84171 29278816 ~ 29284782 (-)
G114514 NA other upstream 280201 29474846 ~ 29475567 (-)
G114628 NA other upstream 644614 29839259 ~ 29839768 (-)
LOC111193670 NA other upstream 765739 29960384 ~ 29964703 (-)
LOC103030897 grm4,LOC108427575,LOC108272196,LOC107708172,LOC107549321,LOC107569297,LOC107716363 other upstream 1039718 30234363 ~ 30601322 (-)

Expression


Co-expression Network