ddi2 (ddi2,LOC107673502,LOC107721177,LOC107667352,LOC107712079)


Basic Information

Item Value
gene id ddi2
gene name ddi2,LOC107673502,LOC107721177,LOC107667352,LOC107712079
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035909.1
NCBI id CM008312.1
chromosome length 44161018
location 35969145 ~ 35979546 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007254282.3
CCTCTGATTCAGATCGCGGTACTCACGCCGAGAGGAAGCGGAGAGCCAGGCTGAGAGAGGAGCTGCAGGTTGGGCGGCTAGCGTCTTTAACTGCCGGAGAAGTCGTGTGTCCATGTTTACGTTATTATAAGGCAACACAGGACGGATCAGATTCTGTTAAGCCAGCACTCTCGCTGTATTATCGAAGTACTACAGCAGTTAAATCAGTGATCGAAAGGAAGGGGGGTAGTCGCTGTGCTCTCCGCCGTAGTGGGCTCCACTGACTGCAGGCAGGCGCGATGCTGCTGACCGTGTTTTGCGCACCGAGGGACCGCTCCGAGACAACTTTCGCCCTGGAAGTCTCTCCGGAGCTTGAACTCAGGGATTTCGTGGCTCTGTGTGAGCTTGAATCAGGAATACCTGCCGGGGAGATTCTGATCTCCTATGCAGAGCAACCTTTGAGAGACCTCACCCGGGCCCTGGGGAATTATGGACTAAAGGATGGAGATGTGTTGGTGTTAAGACAAGCAGACAGAagaccaccaccagcagcagcagcagcagctcagcctTCCTTCCCAGGACTGCCGCGCATTGATTTCAGCTCCATCGCAGTACCCGGTACCTCCTCAAACCAACGCTCCACCAGACAGCAACCCAGTGCTGCCCAAACACCACAGGCCACTTCCCCTGCCTCTTCTCCTCAGGGTTTGGACAACCCCACCCTTTTACGTGATATGTTGCTTGCCAATCCACATGAGCTCTCTCTGCTGAAGGAACGTAACCCACCTCTGGCCGAGGCCCTGTTGAGTGGAGACCTTGAACGCTTCACAAAAGTGCtggtggagcagcagcaggatcGGGctaaaagagagcaagaaagaatcAGACTCCTCACAGCTGACCCCTTTGATCTGGAGGCTCAGGCCAAGATTGAAGAGGACATCAGGCAGCATAATATAGAAGAAAACATGACCATAGCAATGGAAGAGGCACCCGAGAGTTTTGGCCAGGTGGTCATGCTTTATATTAACTGCATAGTCAATGGACACCCTGTTAAGGCCTTTGTTGACTCAGGAGCTCAGATGACCATTATGAGTCAAGCCTGTGCGGAGCGGTGTAACATCATGCGTCTCGTAGACCGTCGGTGGGCTGGGATTGCAAAAGGCGTGGGCACACAAAAGATCATTGGCAGAGTACATTTGGCTCAGGTGCAGATTGAAGGGGATTTCCTGCCATGCTCCTTCTCAATTTTGGAAGATCAGCCTATGGATATGCTGCTAGGACTTGACATGCTAAAGAGACACCAGTGCTCCATTGATCTGAAGAAGAGCGTGCTCCTGATTGGCACGACAGGTACAGAGACACGCTTCTTGCCTGAGGCAGAACTGCCTGACTGTGCCAGACTGGCATACGGGGCAGAGGGGCGAGATGAAGCCAGACCTGAAGAAATTGCAGACCAAGAGCTAGCAGAGGCACTACACAGATCTATACAGGACAGTGATACTGCAGATGGAAAAACTACCTCACCACAGTCCCCACCACTGTCTCTTTGCAAACCTTACAACATGCCCACAAGCTCTTCACCTGCCACAAGTCATACTCGGAGTGTCGCCCTTGACCGCTCCAAGTCTGCCCCATCCTCCACACAACAGCCATCAGAGACATTATTCAGTCCATCCCTAACCCAGGGAGAAAGTAAGCCACATCCGTCTGTTAGCCCTGGCATGGCTGAATACCACCCACCTTATCTCCAAGAAGAGCCTGTGTCATCCCCACCTCAGTTATTGGCTGAGCCTTCCCCTCACAATCCTGTCCGTGGACTGGTTGATGCCTTTGAACCTCAGTCCCAACATGTGACTGATACTGCATTGCCTACCAGCGAGGCAACAGAAGATCTTATCCCACCCATTCTTCCTGCTCAGGAACCACTCTCTAGTACTGTGTCAAAGGACAATGAAGTGACAAACCTTGTAACTTGTGGTGAGTCCGTGAGTCAGTTGGATGCAGACGTTAGGGAGGACATTCCCTTACAAGAGAAAAAAGACACGGAATCTCCATTTACCCACCTAAATACAAGCTCCCAGGCAAGAGCTCAGCTGGAGGAAATGGACATGCTAGATTCTACTGATGCAAAAACAGGTCTTGACATTCCTGATCAGCTCCTAGAAAAAGAACAAGACAGCATTATGAAAGATGTTGCAAACAATCAAGTACATGACTCTACACCTGTTTCAGAGCTGACCCCTCATCACAGCCTTGCAGGTCCATCCAGTTCTTCTGAGCTGCCTCCTATTCACTCAGAGATGGAGAAGAATACGGATGCTAGGTCTGTCTCAAAGAGTGCAGTGCCCTCAGAGAGGGACCAGTCAGGGGTTGACTGCATTCCTTCCCTGGCTCAGGCCCTGAAGGAGCTTCATGAACTTCTGATGTCCAACAGTCATCCTCAGGCTTGTGAACAGTTCTCTCCATCTGCTTCTCATACCACTTTAACAAGACAAGATTCTGAAGGTGTGGACCAGGTTCTTACCACAGAGGATCATGCTAGTCTGGACTCAGCTGTTGAATCATCTTTTTCTCGCACTGCCGCTACCAATGAAACAACTTTTGCCAAATCTGAACATGCTGCTCAAGCAGGGGGTGGAACTATAGACACACCTACCTTAAGCTCTCAAGGGCAGGACGATAAACAAACGAATGAAGTGGAGAATACCAGAATTGAACAAGACACGTCACAGTCTCCTTCATATAACCCTGAAGAATATCAGGTGGGTGGAAACGGGGGTGGAAGTGTCTCGGAGCCAAAAAGAGCAACTCCGGTACAGGGTTTTTTTGAGTTCACAGAGGCTCCTGAAAGTCAGCAGGAAAGTGGAGATGCAAACTCTAGCCCTGATCCCCCCAACTCAGCTGAACCATCACAGCAGCGTCCCCTGTCCGTAGCATGTGGCTCCTCCGCAGACAATTCCAGCCTTGTGCCTGTAGCATCCAGTCATCTTTCGACACAAGCCCCCGAGTCGACTCCTCTCCCCTTTGCAGACTCCATCCAGCCTTCTGCACTGACCTTAACGAGACAGTATCCTGCAGAGCATATTGAGAGGATACAGGCGGCGGGGTTCTCGTCTCTTGAGGCAGCTGAGGCACTTGACCAGGCCGATGGTAGTGTGGAACTCGCCCTTTTGGTGCTCCTGGCCAGAAAGATCACTGTGcccacttaaaattctttacatttatgTAATGGCAGCATCAATTGGTTTCTGAGCCTTTCGTATTAATGCCATATCCCCTTATTTGTGTATAGTTTTGTTTCTAGAATTTGATTAATTCATTCATAGttccccacacacacagtggtcTTGAAGGAGCTGTAAAGGATATTCTCTGCTTTGCTGGTGTAAACTTTTTCACCTCCTTCTGAGTTTTGCATGTTACCTTTGCGAAGTTCTAAAAAGCTGCTGGTTTAAATAGTATGGTTTAAATAAGTTTAGATAACCCTTTTGACAGACATCATTGTCTTGCCTGTTCTTTCAACAATAATTTTATGCTAATTTTACTTAGCATGTAAAACAAGTCGTTGCTTTGCCCATGCAGTGAAGCTGCTGATTGCTGATTTATAGTTTTAAGATGAAGTATGATACATTTTATGGAGTATTAAAAAAGCCCTAATTAGAATGGTCTTGAAGATAAGCGGATATCTGAATAATGGATATTTTTAGTTAAACGTAATTTTCTGTGTCCACACAATTATCCCTTACCtcattgtacttttttatttttattctaaacacAGGTTATGGTGCATATATTAAGCAGTCTTTGGAAATCTGTAAGCAGACATACTTAAATTATGGGCTATGTTTTTGAAAATATGGATGTACAGTAAACTGGTTCTTCTGTCAGTTTTATCTTTTACTATGTGGACAAACTAAACAATGTGCCTGATGTATAGCTGTTTAAAGCTGAAGACCTTTTAAAAGTGCATCTAGAGCAAGTTTCCCAAATGGTTTACATTTATGGCGACAAAAAGATTTACAATGGTGAATTGGCATAGTGATTCTTTAACTAGACATAATTATTGAAAATGATCTTTTAACAAAAAGTGCATCTATGGGAATTTCTCCCTTTTGTAACctgcaataataattaaatattgtacTTTCCATTTCACTTTGGTTTctatattctaattatttaatatttgccAATCCTGTATAACTTGATAATTGTGGGGGTTTTCATGTTTGAATTGGTTGCCttcaatattaaacaatagatTTGTC
>XM_007254283.3
CCTCTGATTCAGATCGCGGTACTCACGCCGAGAGGAAGCGGAGAGCCAGGCTGAGAGAGGAGCTGCAGGTTGGGCGGCTAGCGTCTTTAACTGCCGGAGAAGTCGTGTGTCCATGTTTACGTTATTATAAGGCAACACAGGACGGATCAGATTCTGTTAAGCCAGCACTCTCGCTGTATTATCGAAGTACTACAGCAGTTAAATCAGTGATCGAAAGGAAGGGGGGTAGTCGCTGTGCTCTCCGCCGTAGTGGGCTCCACTGACTGCAGGCAGGCGCGATGCTGCTGACCGTGTTTTGCGCACCGAGGGACCGCTCCGAGACAACTTTCGCCCTGGAAGTCTCTCCGGAGCTTGAACTCAGGGATTTCGTGGCTCTGTGTGAGCTTGAATCAGGAATACCTGCCGGGGAGATTCTGATCTCCTATGCAGAGCAACCTTTGAGAGACCTCACCCGGGCCCTGGGGAATTATGGACTAAAGGATGGAGATGTGTTGGTGTTAAGACAAGCAGACAGAagaccaccaccagcagcagcagcagcagctcagcctTCCTTCCCAGGACTGCCGCGCATTGATTTCAGCTCCATCGCAGTACCCGGTACCTCCTCAAACCAACGCTCCACCAGACAGCAACCCAGTGCTGCCCAAACACCACAGGCCACTTCCCCTGCCTCTTCTCCTCAGGGTTTGGACAACCCCACCCTTTTACGTGATATGTTGCTTGCCAATCCACATGAGCTCTCTCTGCTGAAGGAACGTAACCCACCTCTGGCCGAGGCCCTGTTGAGTGGAGACCTTGAACGCTTCACAAAAGTGCtggtggagcagcagcaggatcGGGctaaaagagagcaagaaagaatcAGACTCCTCACAGCTGACCCCTTTGATCTGGAGGCTCAGGCCAAGATTGAAGAGGACATCAGGCAGCATAATATAGAAGAAAACATGACCATAGCAATGGAAGAGGCACCCGAGAGTTTTGGCCAGGTGGTCATGCTTTATATTAACTGCATAGTCAATGGACACCCTGTTAAGGCCTTTGTTGACTCAGGAGCTCAGATGACCATTATGAGTCAAGCCTGTGCGGAGCGGTGTAACATCATGCGTCTCGTAGACCGTCGGTGGGCTGGGATTGCAAAAGGCGTGGGCACACAAAAGATCATTGGCAGAGTACATTTGGCTCAGGTGCAGATTGAAGGGGATTTCCTGCCATGCTCCTTCTCAATTTTGGAAGATCAGCCTATGGATATGCTGCTAGGACTTGACATGCTAAAGAGACACCAGTGCTCCATTGATCTGAAGAAGAGCGTGCTCCTGATTGGCACGACAGGTACAGAGACACGCTTCTTGCCTGAGGCAGAACTGCCTGACTGTGCCAGACTGGCATACGGGGCAGAGGGGCGAGATGAAGCCAGACCTGAAGAAATTGCAGACCAAGAGCTAGCAGAGGCACTACACAGATCTATACAGGACAGTGGACAGAACTGATGCATATGGACAAACAGCTGGAGAGGGCCCTGTCTACCAGATACTGCAGATGGAAAAACTACCTCACCACAGTCCCCACCACTGTCTCTTTGCAAACCTTACAACATGCCCACAAGCTCTTCACCTGCCACAAGTCATACTCGGAGTGTCGCCCTTGACCGCTCCAAGTCTGCCCCATCCTCCACACAACAGCCATCAGAGACATTATTCAGTCCATCCCTAACCCAGGGAGAAAGTAAGCCACATCCGTCTGTTAGCCCTGGCATGGCTGAATACCACCCACCTTATCTCCAAGAAGAGCCTGTGTCATCCCCACCTCAGTTATTGGCTGAGCCTTCCCCTCACAATCCTGTCCGTGGACT

Function

symbol description
ddi2 Predicted to enable aspartic-type endopeptidase activity and identical protein binding activity. Predicted to be involved in several processes, including cellular response to hydroxyurea; proteolysis; and regulation of DNA stability. Predicted to act upstream of or within proteolysis. Predicted to be located in chromosome and cytosol. Orthologous to several human genes including DDI2 (DNA damage inducible 1 homolog 2).

NR:

description
PREDICTED: protein DDI1 homolog 2 isoform X1

GO: NA

KEGG:

id description
K11885 DDI1; DNA damage-inducible protein 1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007254282.3 True 4256 mRNA 0.46 9 35969145 35979546
XM_007254283.3 False 1855 mRNA 0.53 10 35971597 35979546

Neighbor

gene id symbol gene type direction distance location
LOC103031953 NA coding downstream 1355 35960653 ~ 35967790 (-)
LOC103032599 frs3,LOC107584505,LOC107667350,LOC107568202,LOC107673473,LOC107721202 coding downstream 22311 35933366 ~ 35946834 (-)
LOC103031425 LOC108440580,LOC107673588 coding downstream 49728 35908222 ~ 35919417 (-)
LOC103034932 eno1b,LOC108440571,LOC107721178,LOC107568188,LOC108271510,LOC107712086 coding downstream 79702 35882301 ~ 35889443 (-)
ccdc36 NA coding downstream 120242 35844572 ~ 35848903 (-)
LOC103030273 prkcda,LOC103030273,LOC108440644,LOC107673500,LOC107712078,LOC107721176,LOC107667398,LOC107582675 coding upstream 2548 35982094 ~ 35999917 (-)
LOC103029739 NA coding upstream 33631 36013177 ~ 36029775 (-)
LOC103025932 LOC103025932 coding upstream 56826 36036372 ~ 36039135 (-)
LOC103029202 LOC108440675,LOC108271813,LOC107711038,LOC107673578,LOC107667363 coding upstream 102568 36082114 ~ 36114040 (-)
LOC103030168 itpr1a,LOC108440748 coding upstream 381206 36360752 ~ 36427709 (-)
G116097 NA non-coding downstream 20963 35947731 ~ 35948182 (-)
G116076 NA non-coding downstream 35899 35930934 ~ 35933246 (-)
G116092 ppil1,LOC107667353 non-coding downstream 63143 35901252 ~ 35906002 (-)
LOC111193771 NA non-coding downstream 70428 35892638 ~ 35898717 (-)
G116089 NA non-coding downstream 87578 35881367 ~ 35881567 (-)
G116166 NA non-coding upstream 63820 36043366 ~ 36044196 (-)
G116171 NA non-coding upstream 86069 36065615 ~ 36066279 (-)
LOC111193773 NA non-coding upstream 95932 36075478 ~ 36076803 (-)
LOC111193775 NA non-coding upstream 214999 36194545 ~ 36254205 (-)
G116219 uroc1 non-coding upstream 344594 36324140 ~ 36330054 (-)
LOC103031109 uqcc2,cf125,LOC108440614,LOC107580205,LOC107667355,LOC106565356 other downstream 10327 35955109 ~ 35958818 (-)
LOC103034399 LOC108440553,LOC108271943,LOC107584416,LOC107721179 other downstream 88854 35869803 ~ 35880291 (-)
G116068 myhz2,LOC108440470,LOC108443907,LOC107385141 other downstream 153823 35813621 ~ 35815322 (-)
LOC103033855 oxtr,LOC107749620 other downstream 1117993 34825836 ~ 34851152 (-)
G115681 emc3,LOC107584459,LOC107657885,LOC107667035,LOC101173295 other downstream 1446727 34520957 ~ 34522418 (-)
LOC103028059 ghrl other upstream 77017 36056563 ~ 36062284 (-)
LOC103023810 NA other upstream 1042629 37022175 ~ 37031363 (-)
G116581 eif4b,LOC108441049 other upstream 1061815 37041361 ~ 37045788 (-)
tubgcp5 tubgcp5,chst7,LOC107585157,LOC107582726,LOC107673606,LOC107753407,LOC107582727 other upstream 2253928 38233474 ~ 38248624 (-)
G116805 plcxd1,LOC103035541,LOC105895009,LOC107711026,LOC107673474,LOC108441321,LOC107585164 other upstream 2401724 38381270 ~ 38384598 (-)

Expression


Co-expression Network