G121241


Basic Information

Item Value
gene id G121241
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035910.1
NCBI id CM008313.1
chromosome length 38842236
location 11613126 ~ 11613442 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU163562
cttacagccaatgataacccaaaaaaaacagtatctcagaaaatttgaatattatataagaccaattgttacttttggtagtgtgtgcagtgttccaaatcctgctggaaaatgaaatccgcatctccataaagttgtcagcagagggaagcatgaagtgctgtcagatttttcaggaaaacactgcactgactttggccttgatgtaacacagtggaccaacaccagcagatgacatgtctctccaaaccatcactgaccatcagtaaattttacattttatttgtaaatcaagggaccagagtctggaggaagac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU163562 True 317 lncRNA 0.39 1 11613126 11613442

Neighbor

gene id symbol gene type direction distance location
LOC103028746 NA coding downstream 408 11606619 ~ 11612718 (-)
LOC103029060 NA coding downstream 24259 11585916 ~ 11588867 (-)
LOC103029369 pfdn2,LOC103029369,LOC108439788 coding downstream 28313 11581759 ~ 11584813 (-)
LOC103029689 zgc:110540,LOC103029689,LOC108439787,LOC108278442,LOC107700028,LOC105011305 coding downstream 36353 11572893 ~ 11576773 (-)
LOC103030014 LOC108439763,LOC108278891 coding downstream 45538 11531938 ~ 11567588 (-)
LOC103026606 nxf1,LOC108278769,LOC107669360,LOC107715364,LOC107559416 coding upstream 94742 11708184 ~ 11719860 (-)
LOC103024948 NA coding upstream 127837 11741279 ~ 11751785 (-)
LOC107197275 NA coding upstream 215654 11829096 ~ 11858919 (-)
LOC103037906 NA coding upstream 261546 11874988 ~ 11916264 (-)
LOC111193819 NA coding upstream 403372 12016814 ~ 12024568 (-)
G121227 NA non-coding downstream 121279 11491625 ~ 11491847 (-)
G121226 NA non-coding downstream 134454 11478064 ~ 11478672 (-)
G121221 NA non-coding downstream 164139 11447275 ~ 11448987 (-)
G121211 NA non-coding downstream 239900 11367248 ~ 11373226 (-)
G121076 NA non-coding downstream 941596 10670789 ~ 10671530 (-)
G121312 LOC108439764,LOC107700025,LOC107715360,LOC107756158,LOC107669388,LOC107548223,LOC108279199 non-coding upstream 1719 11615161 ~ 11620970 (-)
G121318 NA non-coding upstream 9900 11623342 ~ 11626799 (-)
G121328 NA non-coding upstream 53671 11667113 ~ 11671048 (-)
G121330 NA non-coding upstream 64670 11678112 ~ 11678588 (-)
LOC111193891 NA non-coding upstream 86487 11699929 ~ 11701791 (-)
G121209 NA other downstream 247639 11363377 ~ 11365487 (-)
LOC111193818 NA other downstream 249820 11362860 ~ 11363306 (-)
LOC111193889 NA other downstream 250578 11357513 ~ 11362548 (-)
G121084 mat2b,LOC107756808,LOC107590055 other downstream 913327 10698000 ~ 10699799 (-)
G121080 hnrnpab,LOC108441033,LOC107653368,LOC107731089,LOC107599380,LOC107713567 other downstream 927100 10681479 ~ 10686026 (-)
LOC111193892 banf1,LOC105010953,LOC108439777,LOC105907417,LOC105019098 other upstream 147684 11761126 ~ 11765088 (-)
G121351 NA other upstream 161462 11774904 ~ 11778872 (-)
G121377 NA other upstream 328352 11941794 ~ 11966777 (-)
LOC107197484 NA other upstream 369972 11983414 ~ 12012377 (-)
G121381 NA other upstream 409167 12022609 ~ 12031011 (-)

Expression


Co-expression Network