LOC103043253 (dck,LOC103043253,LOC107720908,LOC107585435,LOC102787471)


Basic Information

Item Value
gene id LOC103043253
gene name dck,LOC103043253,LOC107720908,LOC107585435,LOC102787471
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035910.1
NCBI id CM008313.1
chromosome length 38842236
location 27272429 ~ 27278712 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007233977.3
GTCTACCGCTGACCAATGGACAGCCTCCGCCTGACCGTCCCCCTCGTTCATTGGCTGAGTTGGTTTATGGCTCCGCCCTGCAGCGCTTTCCGCCAAAAACTGAACCGCGCtttgtacagtgtgtacagtagcTATCCGGTTATCAGTCGGAGCTCAGAGCGGCACCTTTACCGAGCTTCTCCGGGTTTAAACATGGTTCCGACCCCCAAACGAGCCTGTCCCAGCCCTCTGAACGACAGCATGGAGAAGAGGATTAAACGCATCTCTATCGAGGGTAATATCGCTGCGGGTAAATCCACTTTTGTCCGGGCTCTGGAGGAACATGATAAAGCGTGGGAGGTAGTACCGGAACCCATCGCCAGGTGGTGCAATGTACAAACTCAGCACAGCGACTTTGAGgAGCTGACCACCTCTCAGAAGAGCGGGGGTAACGTGCTGCAGATGATGTATGAGAAGCCGGAGCGATGGGCCTACACGTTTCAGAGCTACGCCTGTATGAGCCGTGTGCGTGCTCAGATCAACTCCGCCAATGGCAAACTGAGGGAAGCTGAAAATCCTGTGCAGTTCTTCGAGCGATCGGTCTACAGCGACAGGTATATTTTCGCTGCAAATCTGTATGAGAGCGAATGTGTGAATGAGACTGAGTGGGCTGTTTACCAGGACTGGCACAGTTGGCTGCATAAACAGTTTGGCAAACACATTGAACTGGATGGCATCATCTACCTACGGGCAGCCCCAGAGAGATGTATGGAGCGGCTGCGTGTGAGGGGCAGAGAGGAGGAGCAGGGGATTCCTCTGGAGTATCTGGAGAAACTCCACTACAAACATGAGTGCTGGCTGCAGCACAGAAACATGAGCATGGAGTTTGATTACCTGAATGAAGTCCCCATCCTCACTCTGGACGTTAACGATGACTTCAGAGGAGATAGTATCAAATGTGCCAACATGATCGAAAAGGTGAAAGAGTTTCTGAGCACTTTATGAGTTTCACGTATTACACCTGTGTGtaatacgtgtgtgtgtgtgtgtgtgtgtgtgtgtgttctgtgtaaaTGACATTTTGcgcttaatgtatttttttaattgtattttatgta

Function

symbol description
dck Predicted to enable deoxycytidine kinase activity. Predicted to act upstream of or within nucleobase-containing compound metabolic process and phosphorylation. Predicted to be active in mitochondrion. Is expressed in proliferative region. Orthologous to human DCK (deoxycytidine kinase).

NR:

description
deoxycytidine kinase

GO:

id name namespace
GO:0006139 nucleobase-containing compound metabolic process biological_process
GO:0016310 phosphorylation biological_process
GO:0005524 ATP binding molecular_function
GO:0016773 phosphotransferase activity, alcohol group as acceptor molecular_function
GO:0016301 kinase activity molecular_function

KEGG:

id description
K00893 DCK; deoxycitidine kinase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007233977.3 True 1097 mRNA 0.50 7 27272429 27278712

Neighbor

gene id symbol gene type direction distance location
LOC103043555 mob1bb,LOC108439533,LOC103043555,LOC107584591,LOC105911503,LOC102220180 coding upstream 1417 27244760 ~ 27271012 (+)
rexo4 NA coding upstream 40843 27223678 ~ 27231586 (+)
LOC103042105 prodha,LOC108439536,LOC107661597,LOC106564257 coding upstream 50752 27200415 ~ 27221677 (+)
LOC103041500 wdr38 coding upstream 84226 27179389 ~ 27188203 (+)
ccng2 ccng2,LOC107720902,LOC107661592,LOC107675753,LOC107584590 coding upstream 129171 27137836 ~ 27143258 (+)
LOC103043856 slc4a4b,LOC108411430,LOC107720909,LOC107661601,LOC107675739 coding downstream 7812 27286524 ~ 27361584 (+)
cdk9 cdk9,LOC107752941 coding downstream 123438 27402150 ~ 27408332 (+)
LOC103046602 LOC562049,LOC107752939 coding downstream 152528 27431240 ~ 27546558 (+)
LOC103027631 NA coding downstream 334730 27613442 ~ 27616312 (+)
LOC103026552 col5a1,LOC108415203,LOC107675758,LOC107720871,LOC106568813,LOC107752937,LOC106562962 coding downstream 984802 28263514 ~ 28406805 (+)
G125145 rpl35,LOC107675720,LOC107584597,LOC107585395 non-coding upstream 79725 27189188 ~ 27192704 (+)
G125134 NA non-coding upstream 208998 27063198 ~ 27063431 (+)
G125100 NA non-coding upstream 333938 26938283 ~ 26938491 (+)
G125099 NA non-coding upstream 338671 26933129 ~ 26933758 (+)
G125097 NA non-coding upstream 346488 26924837 ~ 26925941 (+)
G125348 NA non-coding downstream 87304 27366016 ~ 27399651 (+)
G125351 fpgs,LOC107675685,LOC107585466 non-coding downstream 91212 27369924 ~ 27374609 (+)
G125354 fpgs,LOC107720889 non-coding downstream 100879 27379591 ~ 27382591 (+)
G125370 NA non-coding downstream 146188 27424900 ~ 27427321 (+)
G125384 NA non-coding downstream 175398 27454110 ~ 27457902 (+)
LOC103041801 NA other upstream 76674 27193714 ~ 27195755 (+)
G125130 ccni other upstream 154437 27059833 ~ 27117992 (+)
LOC103030814 NA other upstream 1214191 26049491 ~ 26058238 (+)
G124810 NA other upstream 1293554 25950758 ~ 25978875 (+)
G124573 ddt other upstream 1837544 25431743 ~ 25434885 (+)
LOC111193934 NA other downstream 112180 27390892 ~ 27395962 (+)
LOC111193935 NA other downstream 288501 27567213 ~ 27576741 (+)
G125538 NA other downstream 424961 27703673 ~ 27704931 (+)
LOC103039679 NA other downstream 1616359 28895071 ~ 28902014 (+)
G125669 NA other downstream 1640144 28918856 ~ 28921588 (+)

Expression


Co-expression Network