Gene
RNA
| Item | Value |
|---|---|
| gene id | G62503 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000010 |
| NCBI id | null |
| chromosome length | 12265998 |
| location | 3167462 ~ 3167740 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU71183 | True | 279 | lncRNA | 0.33 | 1 | 3167462 | 3167740 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000010_03109809_03114298 | NPL | coding | downstream | 53164 | 3109803 ~ 3114298 (-) |
| CI01000010_03101723_03103968 | SEC22BB, SEC22B, SEC22B.S, SEC22B.L, S22BB | coding | downstream | 63304 | 3100588 ~ 3104158 (-) |
| CI01000010_03033615_03059357 | NOTCH2 | coding | downstream | 108105 | 3032384 ~ 3059357 (-) |
| CI01000010_03025386_03030144 | SLC35A3A, SLC35A3 | coding | downstream | 137183 | 3024271 ~ 3030279 (-) |
| CI01000010_03004426_03005652 | FOXE3 | coding | downstream | 161648 | 3004167 ~ 3005814 (-) |
| CI01000010_03204475_03207149 | MPEG1.2 | coding | upstream | 36695 | 3204435 ~ 3207149 (-) |
| CI01000010_03308058_03308511 | NA | coding | upstream | 139742 | 3307482 ~ 3310347 (-) |
| CI01000010_03494576_03500309 | MPND | coding | upstream | 326566 | 3494306 ~ 3500309 (-) |
| CI01000010_03517080_03524389 | FSD1 | coding | upstream | 349120 | 3516860 ~ 3524389 (-) |
| CI01000010_03527436_03530341 | NA | coding | upstream | 359668 | 3527408 ~ 3530359 (-) |
| G62466 | NA | non-coding | downstream | 156131 | 3011037 ~ 3011331 (-) |
| G62452 | NA | non-coding | downstream | 176756 | 2990437 ~ 2990706 (-) |
| G62334 | NA | non-coding | downstream | 289691 | 2822204 ~ 2877771 (-) |
| G62349 | NA | non-coding | downstream | 537831 | 2629233 ~ 2629631 (-) |
| G62316 | NA | non-coding | downstream | 597686 | 2569370 ~ 2569776 (-) |
| G62506 | NA | non-coding | upstream | 2425 | 3170165 ~ 3170429 (-) |
| G62507 | NA | non-coding | upstream | 2783 | 3170523 ~ 3170723 (-) |
| G62513 | NA | non-coding | upstream | 11104 | 3178844 ~ 3208733 (-) |
| G62476 | NA | non-coding | upstream | 20791 | 3188531 ~ 3192365 (-) |
| G62536 | NA | non-coding | upstream | 107348 | 3275088 ~ 3276063 (-) |
| G61965 | NA | other | downstream | 1622411 | 1424425 ~ 1545051 (-) |
| G61888 | NA | other | downstream | 1921444 | 1244469 ~ 1246018 (-) |
| G61045 | NA | other | downstream | 2591951 | 572753 ~ 575511 (-) |
| CI01000010_03890095_03899058 | SSBP3B, SSBP3, SSBP2 | other | upstream | 722329 | 3890069 ~ 3899058 (-) |
| G64237 | NA | other | upstream | 1062210 | 4229950 ~ 4236416 (-) |
| CI01000010_04612793_04613017 | SMIM15 | other | upstream | 1444756 | 4612460 ~ 4613135 (-) |
| G64564 | NA | other | upstream | 1881415 | 5049155 ~ 5242926 (-) |
