Gene
RNA
| Item | Value |
|---|---|
| gene id | G62513 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000010 |
| NCBI id | null |
| chromosome length | 12265998 |
| location | 3178844 ~ 3208733 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU71193 | True | 470 | lncRNA | 0.35 | 2 | 3178844 | 3208733 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000010_03109809_03114298 | NPL | coding | downstream | 64546 | 3109803 ~ 3114298 (-) |
| CI01000010_03101723_03103968 | SEC22BB, SEC22B, SEC22B.S, SEC22B.L, S22BB | coding | downstream | 74686 | 3100588 ~ 3104158 (-) |
| CI01000010_03033615_03059357 | NOTCH2 | coding | downstream | 119487 | 3032384 ~ 3059357 (-) |
| CI01000010_03025386_03030144 | SLC35A3A, SLC35A3 | coding | downstream | 148565 | 3024271 ~ 3030279 (-) |
| CI01000010_03004426_03005652 | FOXE3 | coding | downstream | 173030 | 3004167 ~ 3005814 (-) |
| CI01000010_03308058_03308511 | NA | coding | upstream | 98749 | 3307482 ~ 3310347 (-) |
| CI01000010_03494576_03500309 | MPND | coding | upstream | 285573 | 3494306 ~ 3500309 (-) |
| CI01000010_03517080_03524389 | FSD1 | coding | upstream | 308127 | 3516860 ~ 3524389 (-) |
| CI01000010_03527436_03530341 | NA | coding | upstream | 318675 | 3527408 ~ 3530359 (-) |
| CI01000010_03544215_03547481 | PRRG1 | coding | upstream | 334787 | 3543520 ~ 3547481 (-) |
| G62507 | NA | non-coding | downstream | 8121 | 3170523 ~ 3170723 (-) |
| G62506 | NA | non-coding | downstream | 8415 | 3170165 ~ 3170429 (-) |
| G62503 | NA | non-coding | downstream | 11104 | 3167462 ~ 3167740 (-) |
| G62466 | NA | non-coding | downstream | 167513 | 3011037 ~ 3011331 (-) |
| G62452 | NA | non-coding | downstream | 188138 | 2990437 ~ 2990706 (-) |
| G62536 | NA | non-coding | upstream | 66355 | 3275088 ~ 3276063 (-) |
| G62540 | NA | non-coding | upstream | 68973 | 3277706 ~ 3314153 (-) |
| G62616 | NA | non-coding | upstream | 158502 | 3367235 ~ 3388238 (-) |
| G62596 | NA | non-coding | upstream | 182603 | 3391336 ~ 3436108 (-) |
| G62636 | NA | non-coding | upstream | 193574 | 3402307 ~ 3402818 (-) |
| G61965 | NA | other | downstream | 1633793 | 1424425 ~ 1545051 (-) |
| G61888 | NA | other | downstream | 1932826 | 1244469 ~ 1246018 (-) |
| G61045 | NA | other | downstream | 2603333 | 572753 ~ 575511 (-) |
| CI01000010_03890095_03899058 | SSBP3B, SSBP3, SSBP2 | other | upstream | 681336 | 3890069 ~ 3899058 (-) |
| G64237 | NA | other | upstream | 1021217 | 4229950 ~ 4236416 (-) |
| CI01000010_04612793_04613017 | SMIM15 | other | upstream | 1403763 | 4612460 ~ 4613135 (-) |
| G64564 | NA | other | upstream | 1840422 | 5049155 ~ 5242926 (-) |
