G331


Basic Information

Item Value
gene id G331
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035897.1
NCBI id CM008300.1
chromosome length 26953843
location 1001561 ~ 1002279 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU412
tcATCATTTCATTTCTCCAACAAAATcagtaacaaaaaaaacgaCAAATGCTTCAGTTAGCGTAAAAATAAAGTGTACACAGTTTAGGAGAAATAAAATTAGTAGCAAAGAACCCAAACAATAAAGTAGTCATAatcataacatttaataataacaattataataacaaataacaataataatattaacaataatagagAACGTGTCAAAGTGTCAGCGGCATTAATATCAGGACACTCTCAGTGaggtgagtgttttttttttttttttttaggccCAGCACCGGCAAACACAGTGTTTCCaccaaaataaactttaaatctcattATTGCTACAAACCTTTCTTCTGCCTCACTTTAATCAAAATATCTACATCAGGCGTCCATATCTCTTATAAATATCTATTTAGTGTGCAAACAGTACAGGTGACCACCAGGAGAAACCTAAAGCATTCAAACCACGCCCTGAAACActaaaccaatcagaacatGTGATTTCACAACAGGAACTGatgtattatgtgttttttaagcaaaatgcTGCTGAACTACTGAAAATATTCTTCTattcttaaaaacaaaagtttaaaatgtacagCTGTAAAACCTAAAATTAGTCATTGAGCACCATGTTTTCCACCGAAATGAATTAAAaacctgttaaacatggtggtggttgttctgaaaccaaaaaaaaac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU412 True 698 lncRNA 0.46 2 1001561 1002279

Neighbor

gene id symbol gene type direction distance location
LOC103043916 NA coding downstream 129582 864798 ~ 871979 (-)
LOC103025162 NA coding downstream 287580 708344 ~ 713981 (-)
pxylp1 pxylp1 coding downstream 476054 504270 ~ 525507 (-)
LOC103031067 NA coding downstream 537727 448578 ~ 463834 (-)
LOC111195070 LOC108442280 coding downstream 697813 295258 ~ 303748 (-)
LOC103021504 LOC103021504,LOC108442331 coding upstream 135966 1138245 ~ 1146382 (-)
LOC111192362 NA coding upstream 490887 1493166 ~ 1496427 (-)
rabggtb rabggtb,LOC107732517,LOC107584851,LOC107576861 coding upstream 705460 1707739 ~ 1717654 (-)
acadm acadm,LOC107674066,LOC107602542,LOC107688505,LOC107584839 coding upstream 717533 1719812 ~ 1729386 (-)
best4 best4,LOC106569841,LOC108262062 coding upstream 761985 1764264 ~ 1772891 (-)
G328 NA non-coding downstream 51041 949833 ~ 950520 (-)
G315 NA non-coding downstream 96017 904612 ~ 905544 (-)
G303 NA non-coding downstream 146072 855070 ~ 855489 (-)
G301 LOC108442328 non-coding downstream 149617 845542 ~ 851944 (-)
G178 LOC108440468,LOC108278266 non-coding downstream 423010 556165 ~ 578551 (-)
G348 NA non-coding upstream 7808 1010087 ~ 1011052 (-)
G337 NA non-coding upstream 28147 1030426 ~ 1030659 (-)
G338 NA non-coding upstream 29576 1031855 ~ 1032891 (-)
G349 NA non-coding upstream 31099 1033378 ~ 1033657 (-)
G354 NA non-coding upstream 36781 1039060 ~ 1039416 (-)
LOC111197534 NA other downstream 145401 855579 ~ 856160 (-)
LOC103037308 LOC108440474,LOC108278112,LOC107585786,LOC107669856,LOC107745208 other downstream 330846 589669 ~ 670715 (-)
yipf1 yipf1 other upstream 862236 1864515 ~ 1873127 (-)
gtf2b tf2b,gtf2b,LOC107585659,LOC107693714,LOC107718116,LOC107691461 other upstream 918201 1920480 ~ 1928255 (-)
znf414 NA other upstream 1421434 2423713 ~ 2434401 (-)
G807 NA other upstream 1547937 2550216 ~ 2600511 (-)
LOC103032016 arpc5b,arpc5,LOC103032016,LOC108431159,LOC104921830,LOC107698380,LOC107599090,LOC103045524 other upstream 1908475 2910754 ~ 2970340 (-)

Expression


Co-expression Network