G98742 (leng8,LOC107700201,LOC107724921,LOC107744285,LOC107672965)


Basic Information

Item Value
gene id G98742
gene name leng8,LOC107700201,LOC107724921,LOC107744285,LOC107672965
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035907.1
NCBI id CM008310.1
chromosome length 11650534
location 9546334 ~ 9547539 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU133123
CAGAAACAGGTCTGACTGTGGAAGGATCAGGAGCACAGGTGAGGCGCAGGTAGTTTTTGGTAATGTCCTGGCAAGTTCCCACTATAGGGCAGTCTTCCCAGCTGAGTCCCTCCTGGGTGCCATTGGGAAGGTCAAAGGAGTTGATGTTCAGCACCAGCGGCTCAGTGCGTTTGGTGTGAAAACGTGCAGCACGACTCTGCTTCTTTGCCTCACGGTTTGGATCATGGAAATCCAAGCCTGCATTACCTCCTTTCCTTTTCTTACCAATGGCACTGCCAGGTTCATCCATGTTCCTGCGTCCGCGATTTGCTTTTCCTCTTCCTCGTCCCCCTCCTCTTCCTCGCTCTCTGTCTTCGCCTCTGCCTCTTCCTGCCCGCTGCTGCCGGCGAGAAAGTGGTCGGAGATCACTGGACATGCTGCTATCTGACTGGGAGCCAGAGTCACTGCGGCGATGTCTACTCCTGTCTCTATGGCGGTTATGAGGAGAAGGTGACCGTGATGAGGAGCGGGACGAGCTGGAAGAGGGGCTTCTCTGTGAGAACACGTTTCTGTAGTTACCCAGCCGAGCTCCGCCCCTGCCACGGGTGGCTCCACCTCGACCAACTGCGTTTTCCTGAGAGCGCTGAGAAACAGCCTCCCATCGAGACTGTCTGGGCTTCAAC

Function

symbol description
leng8 Predicted to be active in nucleus. Orthologous to human LENG8 (leukocyte receptor cluster member 8).

NR:

description
PREDICTED: leukocyte receptor cluster member 8 isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU133123 True 662 lncRNA 0.56 3 9546334 9547539

Neighbor

gene id symbol gene type direction distance location
LOC103044428 NA coding downstream 21524 9508056 ~ 9524810 (-)
LOC103022230 LOC107698273 coding downstream 385635 9140699 ~ 9160699 (-)
LOC103035192 NA coding downstream 553313 8948749 ~ 8993021 (-)
glipr1 NA coding downstream 600705 8940127 ~ 8945629 (-)
LOC103029934 LOC108443716,LOC106606150 coding downstream 824529 8712872 ~ 8721805 (-)
LOC103042898 gnb3a,gnb3,LOC103042898,LOC108432288,LOC107672997,LOC102782474,LOC107549492 coding upstream 175752 9723291 ~ 9743918 (-)
p3h3 p3h3 coding upstream 206694 9754233 ~ 9770056 (-)
LOC103025791 LOC103025791 coding upstream 425742 9973281 ~ 9981178 (-)
LOC103040958 NA coding upstream 451116 9998655 ~ 10011711 (-)
LOC103025485 NA coding upstream 487208 10034747 ~ 10041021 (-)
G98718 NA non-coding downstream 79288 9460960 ~ 9467046 (-)
G98711 NA non-coding downstream 107862 9438109 ~ 9438472 (-)
G98655 NA non-coding downstream 179178 9366468 ~ 9367156 (-)
G98649 NA non-coding downstream 233476 9312620 ~ 9312858 (-)
G98647 NA non-coding downstream 236325 9309733 ~ 9310009 (-)
G98750 NA non-coding upstream 42215 9589754 ~ 9593828 (-)
G98751 NA non-coding upstream 45858 9593397 ~ 9688181 (-)
G98748 NA non-coding upstream 70990 9618529 ~ 9620541 (-)
G98782 NA non-coding upstream 160127 9707666 ~ 9719982 (-)
G98783 NA non-coding upstream 203629 9751168 ~ 9751711 (-)
LOC103027931 zgc:92606,LOC108432344,LOC107549485,LOC107724707,LOC107672985,LOC107598403 other downstream 8664 9529636 ~ 9537670 (-)
yeats4 yeats4,LOC107555875,LOC107590554,LOC106609801,LOC107717680 other downstream 366966 9162401 ~ 9179368 (-)
LOC103034868 NA other downstream 631403 8901468 ~ 8914931 (-)
G98533 osbpl8,LOC107656451,LOC107658748 other downstream 750585 8775798 ~ 8795749 (-)
prelid3a prelid3a,LOC107715058 other downstream 1070422 8467176 ~ 8475912 (-)
LOC103043823 tpi1,tpi1b,LOC107700200 other upstream 12593 9560132 ~ 9578053 (-)
G98804 NA other upstream 252084 9799623 ~ 9800918 (-)
erf erf other upstream 956415 10503954 ~ 10580725 (-)
G99033 NA other upstream 1056391 10603930 ~ 10606219 (-)
G99212 LOC108443719,LOC107595576,LOC107657689,LOC107699452,LOC107593646 other upstream 1708058 11255597 ~ 11260752 (-)

Expression


Co-expression Network