G130287 (aurkaip1)


Basic Information

Item Value
gene id G130287
gene name aurkaip1
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035911.1
NCBI id CM008314.1
chromosome length 35718434
location 7919052 ~ 7922699 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU176204
ATTTCAGGCTTAGATATTAGTGCTAACCTTATTGAACACATAATTTGATGCATCACACAATCACATGGTGctgaaatatatgtttatttcagtcataaCATTATATAAAGTCAATACATTTATTGAGTCCATTCACACATTTCTGATCCAGATCTGAGCAAATAATTTTACACAACGCCGCTTCATCCTCTCAGTGATCAGCTCTTGGGCTGATGATGTTTGAGGTATATTTTGGGTGTGGTCCAGCCCTCCGGTTCCTTTTTCAGTCCAGCGCGTTTCCAGATTCTGATTAGGTCCTTCTCAAACCTAGCCTGCTTTCTCTTCCGTCTGCCATCCAACACCCTCCTCCTCAGGAACTTTGTTCGTTTCAGCAGCTTCTTGTACTTGTGTCTGTTCATCTTCCTGCGCCGAATCTCGAGTACATTTTTACAGCTCAGAGGCGTGGAGCTCTCGCCATCCTCCAGCACGGGCACAGCAGAAGGGGGCAATACCACAGCTTCCTCTATCAGCTCCCCTTCCTCCAGGGGCACAGGGGCCTCCAGAAGTGAAGGTAGTGAGTAGCGTAGTGAAAGCCAGCTTTCTAAAGGAGAAACTGCTAGTTTCCTGGGAACAAGGGCCTCCTCTAATTCAGGCTCTAGCACTGTCCATATACTAGGGGGCTGCTTGTTGCCAGCAGCTGAAGTGGAGTATCTCTGGGTATGATTAGTAACATATCTGGTAGACTGGCAATGCTGCACAGCACTGCAGAGCACCTTGCACTGGTACTGATGAGAACCTGAAACCTGCAGAGCACACTGAGGCGGGGGAGCACTCTTGAGATGATCATGACCAGGTCCTGTACTGGTGCGCTCTTATCTtaAAGCTGCGCACCACTGCCTCCTCAGCTCAATGTGACTCTGTCCCCTTCCTGTCCTCCCGC

Function

symbol description
aurkaip1 Predicted to be involved in mRNA processing. Predicted to be active in mitochondrion. Orthologous to human AURKAIP1 (aurora kinase A interacting protein 1).

NR:

description
PREDICTED: aurora kinase A-interacting protein

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU176204 True 919 lncRNA 0.48 4 7919052 7922699

Neighbor

gene id symbol gene type direction distance location
slc25a33 slc25a33,LOC107708828,LOC107695765,LOC107681985 coding downstream 8122 7897400 ~ 7910930 (-)
tmem201 tmem201 coding downstream 24333 7870566 ~ 7894719 (-)
LOC111194033 NA coding downstream 52906 7865096 ~ 7866146 (-)
pik3cd pik3cd,LOC107718809,LOC107708832 coding downstream 65530 7792614 ~ 7853522 (-)
clstn1 clstn1 coding downstream 243554 7610818 ~ 7675498 (-)
LOC103036864 ccdc187,LOC108433778,LOC107570908,LOC107708822,LOC107718813,LOC107656553,LOC108276045 coding upstream 121426 8044125 ~ 8089672 (-)
LOC103038232 camta1 coding upstream 205398 8128097 ~ 8396241 (-)
LOC103042037 NA coding upstream 533788 8456487 ~ 8484793 (-)
ttc29 NA coding upstream 563988 8486687 ~ 8497554 (-)
LOC103041018 LOC108433381,LOC108275535,LOC107563149,LOC107706984,LOC107664213 coding upstream 597665 8520364 ~ 8528100 (-)
G130224 NA non-coding downstream 110753 7807942 ~ 7808299 (-)
G130181 NA non-coding downstream 192075 7726731 ~ 7726977 (-)
G130176 NA non-coding downstream 207695 7711011 ~ 7711357 (-)
G130173 NA non-coding downstream 214864 7703935 ~ 7704188 (-)
G130171 NA non-coding downstream 227550 7691275 ~ 7691502 (-)
G130288 NA non-coding upstream 647 7923346 ~ 7928202 (-)
G130298 NA non-coding upstream 21556 7944255 ~ 7946614 (-)
G130322 NA non-coding upstream 176147 8098846 ~ 8099847 (-)
G130325 NA non-coding upstream 183181 8105880 ~ 8119060 (-)
G130391 NA non-coding upstream 530878 8453577 ~ 8455898 (-)
ctnnbip1 ctnnbip1 other downstream 128290 7735739 ~ 7790762 (-)
G130093 NA other downstream 523261 7394939 ~ 7395791 (-)
LOC111194060 pex14,LOC107681981,LOC107708844,LOC107716227,LOC107586529,LOC107695784 other downstream 862330 7038930 ~ 7056722 (-)
LOC103044130 tac3 other downstream 1717151 6194674 ~ 6201901 (-)
LOC103042879 LOC108275853,LOC108433379,LOC107716207,LOC107695803,LOC107708859,LOC107570552,LOC107563637 other downstream 2134486 5743993 ~ 5784566 (-)
G130420 vwa5b1,LOC107664114,LOC107599492 other upstream 614305 8537004 ~ 8537987 (-)
camk2n1 NA other upstream 656703 8579402 ~ 8582453 (-)
cptp cptp,LOC108433359,LOC107706969,LOC107697856 other upstream 961892 8884591 ~ 8887165 (-)
LOC103021383 hnrnpa1,LOC108275985,LOC108275986,LOC107707002,LOC107697928,LOC107598948 other upstream 1392599 9315298 ~ 9322119 (-)
G130892 LOC108433414 other upstream 1919640 9842339 ~ 9843488 (-)

Expression


Co-expression Network