G134234


Basic Information

Item Value
gene id G134234
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035911.1
NCBI id CM008314.1
chromosome length 35718434
location 24317875 ~ 24322181 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU181568
AGAGAAACTACATTGATTGTTTTATTGTCTTGAGATGGCATAAAAATCAATACACTCAGCCAGCTGAATAGACTGAGAAGATCAGGAACCGCTCCTCCTTTCCAGTAACATCAGCTTCTCCCTCCCCCCATTTTTTGGGGTTTAGAGGGAAAGGCATCATGAGCAGGAGGAGCGGTGCTTCTGTTCCTCTGGAGCTTTTCAGCAGGCCACCTCGGGTATACTGAACTCGGCCGGCGGATCAAAGAGAGCTGCTCAATCCTCTCTCTGATCCAGGAGGACGAGCCAGACTACAATTCCACTACTGATCCAAATGCAGAGAAGGAGATCACAGTAAATGGAGTGGAGTAAATGATTCACATCTCAGCATGAACATGATAACCAGGATTCCCACAACTCTAAAACATCACACCaaaccagacacacacacacACACACCTCCAGAACCAAATTGAGAAGTTTGACCTTCAGATGGAGCACagaaaactacaaataaaacagACAAGCCTTGAAATTGAGTTGCTGGaatataaaagttaaaagtggGAATAGTTGCTAAGAGTGTATAGATGTGAATGTTCTTACTAAAGAATAAGCAtagttcatacactttttaaccaataaatttccattatttattCAAGACCTTTCCCATTCCTTCAATGCAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU181568 True 666 lncRNA 0.42 2 24317875 24322181

Neighbor

gene id symbol gene type direction distance location
LOC103045451 avpr2,LOC108436342 coding upstream 22601 24242500 ~ 24295274 (+)
LOC103045952 idh3g,LOC108436344,LOC108275983,LOC108425561,LOC108276129 coding upstream 131127 24169405 ~ 24186748 (+)
LOC111194121 NA coding upstream 364305 23950901 ~ 23953570 (+)
LOC103021840 LOC108436304,LOC107741317,LOC106519302,LOC101477062,LOC107560879 coding upstream 459973 23834354 ~ 23857902 (+)
uba3 uba3,LOC108435248 coding upstream 485363 23813195 ~ 23832512 (+)
LOC111194043 NA coding downstream 220065 24542246 ~ 24550608 (+)
fkbpl NA coding downstream 476344 24798525 ~ 24801627 (+)
trnan-guu_2 NA coding downstream 482621 24804802 ~ 24804873 (+)
ccdc115 ccdc115 coding downstream 489716 24811897 ~ 24814853 (+)
LOC103033727 LOC103033727,LOC108436326,LOC108276432 coding downstream 493188 24815369 ~ 24820684 (+)
G134233 NA non-coding upstream 60772 24256871 ~ 24257103 (+)
G134225 NA non-coding upstream 88779 24228557 ~ 24229096 (+)
G134197 fam120c,LOC108436345,LOC107741318,LOC107657034,LOC107562475 non-coding upstream 170080 24141070 ~ 24147795 (+)
G134204 NA non-coding upstream 195715 24121407 ~ 24122160 (+)
G134085 LOC108435216,LOC108275538,LOC105013740,LOC104924681 non-coding upstream 500640 23815916 ~ 23817235 (+)
G134334 arhgap4,LOC108436338 non-coding downstream 39094 24361275 ~ 24364475 (+)
G134359 NA non-coding downstream 112932 24435113 ~ 24437873 (+)
G134349 NA non-coding downstream 161842 24484023 ~ 24484838 (+)
G134369 nsfl1c,LOC107741325,LOC106566439 non-coding downstream 182186 24504367 ~ 24510768 (+)
G134370 NA non-coding downstream 201218 24523399 ~ 24523781 (+)
LOC103037602 LOC108435244 other upstream 647919 23655148 ~ 23669956 (+)
LOC111194020 NA other upstream 1910624 22405498 ~ 22407251 (+)
G133509 NA other upstream 3243824 21069316 ~ 21074051 (+)
G133503 NA other upstream 3299898 21011730 ~ 21017977 (+)
G133502 NA other upstream 3301959 21009907 ~ 21015916 (+)
G134236 sps2,ssr4,LOC107560911,LOC108436301,LOC108275956,LOC107671948,LOC107737640,LOC107741342,LOC107562474 other downstream 1314 24323495 ~ 24336745 (+)
LOC103040548 myh7b,myh7bb,LOC107672010,LOC107737633,LOC107657025,LOC107741323,LOC107562469,LOC107560867 other downstream 135695 24457876 ~ 24480372 (+)
LOC103040021 trpc4ap,emp3b,LOC107741324,LOC107656986,LOC107562468,LOC108436335,LOC107741326,LOC107562456,LOC107657024,LOC107671979,LOC107737636,LOC107560919 other downstream 167724 24489905 ~ 24503010 (+)
LOC103036968 LOC108436332 other downstream 283468 24605649 ~ 24661534 (+)
G134426 NA other downstream 299727 24621908 ~ 24632130 (+)

Expression


Co-expression Network