LOC103045451 (avpr2,LOC108436342)


Basic Information

Item Value
gene id LOC103045451
gene name avpr2,LOC108436342
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035911.1
NCBI id CM008314.1
chromosome length 35718434
location 24242500 ~ 24295274 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007249951.3
GAGAGAAATCAGACCCCAGCTGATTCAGGGGCtgactgatcacacacacacacgcacacacacacacacacacactgctcagtACAGTCTAACCAGTATAATGAACAGTCTGCGCTCACCTTTAATATCCCTCCGccaaacactgagagaaagttCAGCGGGAGACTGAGTgaggagcggagcggagcttaTGGAGGAGAGAGCGGCCGGAGCCGCCAGAGGAGCAGCGGAGAAAGTGGACTAGTGGACACcagacccagagagagagagagagagagctggGCCTCAGGCATGACGACGGCTTCGTGGGAAGTGGATTTGACTCACTCTAACGGCTCCACTCTGAGGACGAACCTGGCCGGCTCTCTGTTCAACTTGAGCAGTAGCTTTGGTGGTACGGAGGCCTTCCTGTGGCTCACCTCGGAAAACGGCTCCTGGACCACCTCGGGCCCCTCGTTGGCACCGGCGGGGAAAGGGCGGATACGGGACCAGGCGCTGGCCCAGGCTGAGATCACTGTACTGGGGCTGGTGTTAGCACTCACCACACTGGGGAACAGCTTTGTGCTGTGGGTGCTGCTGCGCCGGAGAAAACACCATGCACCCATGCACCTCTTCATGATCAACCTGTGCGTGGCTGACCTGGTGGTGGCCTTCTTTCAGGTTCTGCCGCAGCTGGTGTGGGACATCACCGAGCGTTTCCAGGGCCCTGACGCGCTGTGCCGTTCCGTCAAATACCTGCAGATCGTGGGAATGTTTGCCTCCTCGTACATGATCGTCGCCATGACAGTGGACCGCCACTATGCTATCTGCTGCCCCTTGCAGGCATACAGAGGAGGAGAGACCTCTCGCTGGAACACCCCCATTATGACAGCCTGGGGCCTGGCCTTGGTACTCAGTTTACCACagGTCTTCATCTTCTCACGGTCGGAGGTGGCCCCGGGGGATTTTGAGTGCTGGGGTCACTTTGCTGAGCCGTGGGGCCTCAAGGCTTATGTCACCTGGATGACTGTGGCTGTCTTCATTCTGCCCGCATTTATCATCACCGTGTGTCAGGTACGCATCTTCAGAGAGATCCATGACAACGTCTACCTGAAGTCAGAGCGAATGGTGACGGCAGAGTTTAAGCGGAACTCAGTGCTTTTTCATTTCCCTCAGAGAGAAGGGCATCGTGGGAGGTCCTGTAGTGGTAGAGACAGAGAGGGGCGGGGCAGCCATTCTCATCAGATGGACGGCAGCCTCCATGGCCGGCATCGTGGCAGCCCCGTTCGCCCCCCACCTACCCCGACTGACCCTCAGAGCTCGTACGACAGTCTCTCCATTACCTGTGACCCCTGTGCCGTGCCCCTCCCCTCTTCAGAGATCTCTGCCTCCACCACTCCCCGCTTACTCAACTTCAGCCCTGAACACGCCCCGGGGTCTCCCCCAGACCCCACTCACCCACACACCATGCCCACCAATAACTCCTGTGCCCGGACCAGAGGCTCCTCCTCATTGGCTGGACAGCTTTCGGGTACTCCAGACTTGTGGCCGGATGTGCTCCCAGACACAACAGCTCTTGGAATGCCTACCCAGTATCCTCCCCTTCCGCCTCCCTCAGGTATCTCCAAGGCCATGTCCAAGACGGTGAGGATGACACTGGTCATAGTGCTGGTCTACACAGTCTGCTGGTCTCCATTCTTCATCGTCCAGCTCTGGGCAGCCTGGGACCCCAACCCACCAGATCAAGGAGTAGCATTTACCATCCTGATGCTGCTGGCCAGCCTGAACTCCTGCACGAACCCCTGGATCTACACAGCCTTCTCCAGCAGTGTGTCACGGGAGCTGCTGGCTCTGCTGCGCTGTAGAGTACCTTCACCACGCAGGGGATCTTTACCCGACGACTCCACCgtcacacacacctccaccactACCAAGGACAGCATCTACTGACTGGTACACACACAGgccactctacacacacaggAAACTACTGTCCAGAAATACACGGGTATACCACCACAATCCATCAAATCCATCACCATTTCCATCACACTACATCCCCGAAACATCCAAAACTGACTCATAATAACTCATAATAACCAGGGACAGAAGCTGTGGGCAAAGTCAATCAAAAATATTGTCTCACGTacacaaattaatatttaaaagtttggaatcacTTGTTTTATTAGTTACCACAGTTGTGATATTAGGAAGTAACttctaaaatcataaaaaaattattaaaaaataccgTATATGCCATCCAATAAAAAGcaatcttcatttttgttgatttttagtttactacataatttgaacatacaaacTCTCATATGCCCCATGTCAGAATTTCTtgatggaccaataaaaattctctttttttgcattgctttccattgaaagttaaaaaagttaaatatttcttttgtaaagcttttttttgaaAACCCATTATCcaattttatttgcaaatatgAATTTTGAAAAATTAGAAACCGCTTTCTATCTAATGTCTGACTTTACATATGAAATAGGAAATTGCTTTTAATCCATCTGTCctgttttgcatttatttatcagGACAGCACAaacctcttttaaaaaaaacaaaagaccaAAATTAGTGGGTcgacaaaatattttaaatattttaatattttcaatcCCCATCTGAAACCCACCCCCTTCCCActctccttctttttttcttttttttctaattttttccccaatttttccccaattt
>XM_022677379.1
GAGAGAAATCAGACCCCAGCTGATTCAGGGGCtgactgatcacacacacacacgcacacacacacacacacacactgctcagtACAGTCTAACCAGTATAATGAACAGTCTGCGCTCACCTTTAATATCCCTCCGccaaacactgagagaaagttCAGCGGGAGACTGAGTgaggagcggagcggagcttaTGGAGGAGAGAGCGGCCGGAGCCGCCAGAGGAGCAGCGGAGAAAGTGGACTAGTGGACACcagacccagagagagagagagagagagctggGCCTCAGGCATGACGACGGCTTCGTGGGAAGTGGATTTGACTCACTCTAACGGCTCCACTCTGAGGACGAACCTGGCCGGCTCTCTGTTCAACTTGAGCAGTAGCTTTGGTGGTACGGAGGCCTTCCTGTGGCTCACCTCGGAAAACGGCTCCTGGACCACCTCGGGCCCCTCGTTGGCACCGGCGGGGAAAGGGCGGATACGGGACCAGGCGCTGGCCCAGGCTGAGATCACTGTACTGGGGCTGGTGTTAGCACTCACCACACTGGGGAACAGCTTTGTGCTGTGGGTGCTGCTGCGCCGGAGAAAACACCATGCACCCATGCACCTCTTCATGATCAACCTGTGCGTGGCTGACCTGGTGGTGGCCTTCTTTCAGGTTCTGCCGCAGCTGGTGTGGGACATCACCGAGCGTTTCCAGGGCCCTGACGCGCTGTGCCGTTCCGTCAAATACCTGCAGATCGTGGGAATGTTTGCCTCCTCGTACATGATCGTCGCCATGACAGTGGACCGCCACTATGCTATCTGCTGCCCCTTGCAGGCATACAGAGGAGGAGAGACCTCTCGCTGGAACACCCCCATTATGACAGCCTGGGGCCTGGCCTTGGTACTCAGTTTACCACagGTCTTCATCTTCTCACGGTCGGAGGTGGCCCCGGGGGATTTTGAGTGCTGGGGTCACTTTGCTGAGCCGTGGGGCCTCAAGGCTTATGTCACCTGGATGACTGTGGCTGTCTTCATTCTGCCCGCATTTATCATCACCGTGTGTCAGGTACGCATCTTCAGAGAGATCCATGACAACGTCTACCTGAAGTCAGAGCGAATGGTGACGGCAGAGTTTAAGCGGAACTCAGTGCTTTTTCATTTCCCTCAGAGAGAAGGGCATCGTGGGAGGTCCTGTAGTGGTAGAGACAGAGAGGGGCGGGGCAGCCATTCTCATCAGATGGACGGCAGCCTCCATGGCCGGCATCGTGGCAGCCCCGTTCGCCCCCCACCTACCCCGACTGACCCTCAGAGCTCGTACGACAGTCTCTCCATTACCTGTGACCCCTGTGCCGTGCCCCTCCCCTCTTCAGAGATCTCTGCCTCCACCACTCCCCGCTTACTCAACTTCAGCCCTGAACACGCCCCGGGGTCTCCCCCAGACCCCACTCACCCACACACCATGCCCACCAATAACTCCTGTGCCCGGACCAGAGGCTCCTCCTCATTGGCTGGACAGCTTTCGGGTACTCCAGACTTGTGGCCGGATGTGCTCCCAGACACAACAGCTCTTGGAATGCCTACCCAGTATCCTCCCCTTCCGCCTCCCTCAGGTATCTCCAAGGCCATGTCCAAGACGGTGAGGATGACACTGGTCATAGTGCTGGTCTACACAGTCTGCTGGTCTCCATTCTTCATCGTCCAGCTCTGGGCAGCCTGGGACCCCAACCCACCAGATCAAGTTTGACCTGCTGGTCGCCAAGTAACCAGCGCATCCCTAAACAAATGTTCTCTGAGCTGGAAGCATGAATGGTACCTTATGGCCAAGTTCTCATGTTGCACTAGTGACCTAATACATCAgggatgaataaaaaaaaaattcagtca

Function

symbol description
avpr2 Enables vasopressin receptor activity. Involved in negative regulation of cell population proliferation. Located in cytoplasmic vesicle; perinuclear region of cytoplasm; and plasma membrane. Implicated in nephrogenic diabetes insipidus and nephrogenic syndrome of inappropriate antidiuresis.

NR:

description
PREDICTED: vasopressin V2 receptor-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007249951.3 True 2728 mRNA 0.50 6 24242500 24295274
XM_022677379.1 False 1871 mRNA 0.57 6 24242500 24291312

Neighbor

gene id symbol gene type direction distance location
LOC103045952 idh3g,LOC108436344,LOC108275983,LOC108425561,LOC108276129 coding upstream 55752 24169405 ~ 24186748 (+)
LOC111194121 NA coding upstream 288930 23950901 ~ 23953570 (+)
LOC103021840 LOC108436304,LOC107741317,LOC106519302,LOC101477062,LOC107560879 coding upstream 384598 23834354 ~ 23857902 (+)
uba3 uba3,LOC108435248 coding upstream 409988 23813195 ~ 23832512 (+)
LOC103023698 LOC108435245,LOC108425699,LOC105906847,LOC108435246,LOC103365807,LOC105923626 coding upstream 519489 23717064 ~ 23723011 (+)
LOC111194043 NA coding downstream 246972 24542246 ~ 24550608 (+)
fkbpl NA coding downstream 503251 24798525 ~ 24801627 (+)
trnan-guu_2 NA coding downstream 509528 24804802 ~ 24804873 (+)
ccdc115 ccdc115 coding downstream 516623 24811897 ~ 24814853 (+)
LOC103033727 LOC103033727,LOC108436326,LOC108276432 coding downstream 520095 24815369 ~ 24820684 (+)
G134225 NA non-coding upstream 13404 24228557 ~ 24229096 (+)
G134197 fam120c,LOC108436345,LOC107741318,LOC107657034,LOC107562475 non-coding upstream 94705 24141070 ~ 24147795 (+)
G134204 NA non-coding upstream 120340 24121407 ~ 24122160 (+)
G134085 LOC108435216,LOC108275538,LOC105013740,LOC104924681 non-coding upstream 425265 23815916 ~ 23817235 (+)
G134083 NA non-coding upstream 435959 23804250 ~ 23806541 (+)
G134234 NA non-coding downstream 22601 24317875 ~ 24322181 (+)
G134334 arhgap4,LOC108436338 non-coding downstream 66001 24361275 ~ 24364475 (+)
G134359 NA non-coding downstream 139839 24435113 ~ 24437873 (+)
G134349 NA non-coding downstream 188749 24484023 ~ 24484838 (+)
G134369 nsfl1c,LOC107741325,LOC106566439 non-coding downstream 209093 24504367 ~ 24510768 (+)
LOC103037602 LOC108435244 other upstream 572544 23655148 ~ 23669956 (+)
LOC111194020 NA other upstream 1835249 22405498 ~ 22407251 (+)
G133509 NA other upstream 3168449 21069316 ~ 21074051 (+)
G133503 NA other upstream 3224523 21011730 ~ 21017977 (+)
G133502 NA other upstream 3226584 21009907 ~ 21015916 (+)
G134236 sps2,ssr4,LOC107560911,LOC108436301,LOC108275956,LOC107671948,LOC107737640,LOC107741342,LOC107562474 other downstream 28221 24323495 ~ 24336745 (+)
LOC103040548 myh7b,myh7bb,LOC107672010,LOC107737633,LOC107657025,LOC107741323,LOC107562469,LOC107560867 other downstream 162602 24457876 ~ 24480372 (+)
LOC103040021 trpc4ap,emp3b,LOC107741324,LOC107656986,LOC107562468,LOC108436335,LOC107741326,LOC107562456,LOC107657024,LOC107671979,LOC107737636,LOC107560919 other downstream 194631 24489905 ~ 24503010 (+)
LOC103036968 LOC108436332 other downstream 310375 24605649 ~ 24661534 (+)
G134426 NA other downstream 326634 24621908 ~ 24632130 (+)

Expression


Co-expression Network