LOC103044767


Basic Information

Item Value
gene id LOC103044767
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035911.1
NCBI id CM008314.1
chromosome length 35718434
location 29672897 ~ 29681865 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_022677534.1
GTTCCTCGTGCGCCAGGAGGGAAAGCTGAGGAGAAACCGGTCTGTCTGCAGCGTTTGCAGAGTTTCTCAGTTCCGCCACTTTCAGAAACTCACAGCAGCTTTAGACTCCAGTTTAAAGGAAGCAGAGAAATTATGTCTAAACCTAAGTTAGCTGTGTTTGATCTCGatTACACACTCTGGGAGTTTTGGGTGCAGGGTGTAGACTCACCTTTTCACAAAGATAaaagtgCAAGGGTACTGGACTCCAGTCACTATCACTTACTTCTTTTTAAAGACACTGTAGAGATATTGCGTTCTCTTCAAGCTCAGGGCATCCAGATTGGCATTGCATCACGCACAGGAGACACAGATGGAGCCAATCAGCTGCTTTCCCTCTTTGACTTGGACCAGTACATTTCCTTCAGAGAGATTTACCCGGGGTCAAAGATCACCCACTTCAAAAGGTTGCAGGCAGACAGTGGAGTTCCATTTACAGACATGATGTTCTTTGATGATGAGCAGAGGAACATCATAGACGTCAGCAGCCTGGGAGTGCACTGTGTGCTGGTTCATGAAGGAGTGACGTCCAAATTAGTCAACGAGGAGCTTCAGCAGTTTCAGAAGAAGCCCTGAGTTTATCTACCTCTGCTTCAGTGGTCACCACAGCCTGACCACACCTCACCTGGTCACTGTGCACTGTAAGACTGTGGGcagtgctttatttattttagaatatcTGCTCTGAAGAGTGTGAGAAAAATTGTTACATACTCACCAAAAGTGAAACTGCACTTACATTTAACCTTTCCTAACAAaatgtttacatatttaaaaatcatgaaaTTGTTTGAAGTAAAGTACAGAAATtatggtactttttttttttttacttgtacatttttttatgaaatgtatttttataatctGTATTGTTGTCagaataagtattttagaacaGATTTTAAAAGAGATTGTTTAGCAAACAGATATATTGgctgtttttgtttaaataaagccTGAAACTTT

Function

GO:

id name namespace
GO:0008152 metabolic process biological_process

KEGG:

id description
K17619 MDP1; magnesium-dependent phosphatase 1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_022677534.1 True 1005 mRNA 0.40 6 29672897 29681865

Neighbor

gene id symbol gene type direction distance location
LOC103044459 NA coding downstream 1418 29658396 ~ 29671479 (-)
rnf146 rnf146,rn146,LOC101067458,LOC106605535 coding downstream 220930 29446027 ~ 29451967 (-)
LOC103039434 LOC103039434,LOC108275705,LOC107573937,LOC107737944,LOC107694639,LOC107566551 coding downstream 366195 29301038 ~ 29306702 (-)
LOC103039130 eno3,LOC108416151,LOC107737945,LOC107694617,LOC101175132 coding downstream 376148 29287828 ~ 29296749 (-)
LOC111194136 NA coding downstream 408666 29259603 ~ 29264231 (-)
tmem27 NA coding upstream 33989 29715854 ~ 29734326 (-)
LOC103043345 NA coding upstream 255746 29937611 ~ 29945843 (-)
LOC103043043 NA coding upstream 265917 29947782 ~ 29989266 (-)
prpf6 prpf6,LOC107673318,LOC107705744,LOC107697009 coding upstream 375281 30057146 ~ 30086561 (-)
naa10 naa10,LOC107693544,LOC107723122,LOC107705681,LOC107696956 coding upstream 919462 30601327 ~ 30607046 (-)
G135972 NA non-coding downstream 257879 29360169 ~ 29415018 (-)
G135987 NA non-coding downstream 273167 29397397 ~ 29399730 (-)
G135971 NA non-coding downstream 328654 29343952 ~ 29344243 (-)
G135970 NA non-coding downstream 330936 29325670 ~ 29341961 (-)
G135959 NA non-coding downstream 433166 29239530 ~ 29239731 (-)
G136105 NA non-coding upstream 189302 29871167 ~ 29936973 (-)
G136169 NA non-coding upstream 345169 30027034 ~ 30027279 (-)
G136174 NA non-coding upstream 405246 30087111 ~ 30087337 (-)
G136198 NA non-coding upstream 451755 30133620 ~ 30174558 (-)
G136225 NA non-coding upstream 639745 30321610 ~ 30327845 (-)
LOC103038817 LOC103038817 other downstream 392205 29274161 ~ 29280692 (-)
LOC103034081 NA other downstream 425512 29242243 ~ 29247385 (-)
G135910 NA other downstream 551226 29067891 ~ 29121671 (-)
LOC103037426 NA other downstream 858279 28809292 ~ 28814618 (-)
LOC103032909 pik3ca,zgc:158659,LOC107653898,LOC107571432,LOC105891463,LOC102200943 other downstream 932557 28708643 ~ 28740340 (-)
G136173 NA other upstream 366416 30048281 ~ 30055728 (-)
G136691 NA other upstream 2685328 32367193 ~ 32367462 (-)
G136773 NA other upstream 3101209 32783074 ~ 32784304 (-)
pi16 NA other upstream 3804352 33486217 ~ 33511035 (-)
G137043 NA other upstream 3865490 33547355 ~ 33550978 (-)

Expression


Co-expression Network