CI01000012_05708007_05735678 (MAP3K4)


Basic Information

Item Value
gene id CI01000012_05708007_05735678
gene name MAP3K4
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000012
NCBI id null
chromosome length 13770000
location 5708007 ~ 5735985 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000012_05708007_05735678.mRNA
GCTCAAGGACTCGTCCAAAGATGTGCCCCAGCGGAATACTGAGGTGGATGAGTCTTGGGACGAGCCCAGCCAGGAAGAGGAGAATCTCTACAGCACCTCCCCTCCCCGCACTCCTCGGCAGATGAAACGCATGTCCAACAAACACCAGAGAAACAGCCAGGGGTCAAAGGGCAAAGAGAAGCCGTCTTCCTCCAGCCCGTTGTCTCAACGAGAACGTGAAGGAGCCAGATCAGCCGAGCCTCCTGAAGAACACAGCTACAAGCAGGAAAAGAAGCAGCGCTTCAATCAGCGCTCCAACGAGCGGGACAGCAAGTTTGAGGGCTCCTTCATGCTGGATTCGGTGTCCAAGTCCAGTACCATTGGTTCCAGAAACATGGATCCCCGCAAGCCCTACCTGAGCCTGGGCATGCTGCCTGTGCGCACCCACCGGCAGACCTCACGCACAGACTGTCCGGCGGACCGCCTCAAGTTCTTTGAGACTCTGCGGCTGCTGCTTAAACTCACCTCCATGTCATCCAAGAAGAAGGAGAAGGAGCAGCGTGGCCTGGAGAACACTGCCTTCATGGGCCAGAACAACGAGGTCATCTGGTTGGAGTTGCAGGCCTGGCATGCCCGCCGTAGCGTCAATGAGCAGGACTTGTACCTATACACTGCCCGCCAAGCCATACCTGACATCATCAACGAGGTTCTGCACTTCAAAGTGGATTATAGCAGCCTAGCCGGGCTTGAGAGCAACGCCTCGGTCGAGGAGAGCAACTCCTGTCACGGTGAAACCAACTGCAGGGACGATCCGTTTAGCTTTACCACCTGTTCCACGTCCTGGGGAGAGATTGATGCCGCTGCTCCACTTTCTTCAGCGCTGGAGTGCCGGGAGCACCTGCAAAGGCAGCGAGTAGCTTTCGATCAGGTCAAGCGGGTCATGTCTCTGTTGGAGTCAGTGGAGGCTCTTTACCCATCACTGCAAACCTTGCAGAAGGACTACGAAAAGTACGCAGCTCGGGATTTCCAGGGCAGGGTGCAGGCGCTCTGCTTGTGGCTCAATATCACTCAGGACCTGAACCAGAAGCTGCGTGTAATGGGCACCGTGCTGGGCCTCAGGGACCTTTCCCGCATCGGCTGGCCCATCTTCGAGATCCCCTCGCCTCGCTGTTCCCGTGGCAATGAGGATGATGAGGATGACACTGAGTCCACCGCTACCTTCACCGCCGACAACGACGGGGAGGAAAGGACCTTGAGCGAGGCGACAAGTGATGGGGAGCAGTCGCCTTGCCTCACACCAAAGTTTTCACGCCTCATTTCAGAGGAGGAGTTTCTCCCACGGGACAACGAGACCTGCTACTGTCCCACTGCCATATACAGGCCGTTTGTGGATAAGGCACTTAAACAGATGGGACTGCGTAAACTGATCCTCAGACTGCACAAGCTGATGGACCGCTCGCTGCAGAGGTCCAGAACTGCTCTGTTGAGTCACATGCCGTCTCAAGAGCTGTCAGTGGTCCCGGGTTATTCTTTGCAGCACTGTGACTACCTTCCAGAGCTATCTCGTCACGTGTCTGGTCAGGTGGAAGAGGAGGCGGAGTCAGGACAAGTATCGTGGGAGGAGCTAATGGATATGGACCTGCCCTCATTCCGGCCGGCTTTCTTGGTGCTTTGCCGTGTGCTGCTAAATGTTATTCACGAGTGCCTAAAACTGCGCCTTGAGCAAAGGCCTGCAGGGGAACCATCCCTGCTTAGCATCAAGCAGTTGGTGCGTGAGTGTAAAGAGGTTCTTAAAGGAGGGCTCCTGATGAAGCAGTACTACCAGTTCATGCTGCGAGGCGTCGTCACTGACCCCCAGGGTCTGCAGACTAACGCCAACATCGACGAGTTTGAGGAGGATCTCCATAAAATGCTAGAGGTGTACTTTGACTATATGCGCAGCTGGATCCAGATGTTACAGCAGCTGCCTCAAGCCTCCCACAGCCTGAAGAACCTGCTGGAGGAGGAGTGGAACTTCTCCAAAGTCATCACTCCATACATCCGGGGTGGAGAAGCCCAGTCTGGGAAACTCTTTTGTGATATTGCTGGCATGCTGCTAAAATCCACTGGAGACTTTCTGGATGCAGGACTTCAGAAGAGTGGCAATGAGTTCTGGGAGTGTGCAGATGATAGCACTGCCTCGGATGAAATCAGGCGTTCAGTGATTGAGACAAGTCGCTCACTCAAAGAGCTCTTCCATGAAGCCAGGGAGAGAGCATCTAAAGCGCTGGGCTTTGCCAAGATGCTGCGCAAGGATCTTGAGATTGCTGCAGAATTCAGCCTAACAAGTGGAGTACCCTCTCTCCTCCAAGCTCTGAAGGCCAAGAATTACGTCAAAGTTCAAATCCCAGGACTGGAAGAGCTCCAGGTGTTTGTCCCTTGTAATCTGATGGACCAGCGGCTGGTCATCTTGCAGCTGTTAAATGCAGCAGCTGGAAAGGACTGCTCAAAAGAGCCAGACGAGATCCCAGAATTTGAGGCCTACCTGCTCATGAGCAAGCATGGAGTCGGGGAATCGACCACCGATGGAACTTGGGCTGAGTGGGATGGCACTGTGCTCAAACTGGTGCCTCAGATGGAGACTGTGGACACTTTACGGGCCATGAAGTCGGCCCACTTGGTGACACAACGCAAAGCTTTCCAGTTATCAATGGAAGAAATTCTCACCCTCAGCCGAGAGCAGACATCCAGCCAGCCGCTTATCGTCTGCGCCCTGGAACAGCTCAAGAATGAAGCTCTCCAGCTGTGCATCAAGATCAACACAGCAATCGACCGTGTGGAATACATGTTCATGTCAGAGTTTGAGGCTGAGGTGGAGGAGACAGAGAAGGCCACACTGCAGCAGTATTACAGAGAGGCCATGATTCAGGGCTACAACTTTGCTTTTGAGTACCATAAAGAGGTTGTTCGGCTGATGTCTGGAGAGTTCAGACGACGAATAGGGGAGCGCTACATCGCTTTTGCCCGCAAGTGGATGAACTTTGTCCTCACAAAGTGTGAAAGTGGAAGAGGCACTCGTCCACGGTGGGCGACACAGGGCTTTGATTTTCTTCAAGCGATTGAGGCTGCGTTTATATCAGCCTTGCCAGAAGATGACTTTCTGAGTCTGCAAGCTCTGATGAATGAATGTATCGGTCATGTTATCGGCAAACCGCACAGTCCAGTCAGCAGTATGTACTTTGGCCCACGAAACAGCCCTCGACCTGTCAAAGTCCCCCGTTGCCATAGTGATCCTCCAAACCCATACCTCTTCATCCCTTCATCTCATGCCGAGGGTTTCAGCTGTCGGAGTCTCCCGTGTGATCTGCGTACCCAGTTGTGTCCCCCAGGTCCCCGCCCCGCCCCTCCATTACCCCCAGGGGAACACGGCCACGCCACCAAATCTTCCGGCGGCGTGCCCAATGACATCAGGGGCTCCAATGTACATGAGAACGACCGTCTCTCATCTGTGGCGGCGGAGCTGCATTTTAAATCCCTCAGTCGCCATTCTAGCCCGACAGAGGACAGAGAAGAGCCCTCGTATCCTAAAGGAGACCCCAGCAGTACGGCCCGCCGCAGCTGGGAGCTCCGCAACTTCATCAGCCAGTCAAAAGACACAGCAGCACGTCAAAGCCCTATGGAGGCTGTGCGGCGCTCCATACGCACCTTCGACGACAAGCACTATTTGCTCATGAGACAGCGAAACATCATAGGACAGGTGTGCAACACCCCCAAGTCCTACGATAATGTCATGCATGTGGGCCTGCGCAAGGTCACCTTCAAATGGCAGAGAGGCAACAAGATAGGCGAAGGGCAGTATGGAAAGGTTTACACTTGCATCAATGTGGACACTGGTGAACTGATGGCCATGAAGGAGATTCGCTTTCAGCCCAATGACCACAAAACCATAAAGGAAACGGCCGATGAGCTGAAGATATTTGAAGGAATCAAACATCCCAACCTTGTCCGCTACTTTGGCGTTGAGCTGCACAGGGAGGAGATGTATATCTTTATGGAGTACTGTGACGAGGGGACCCTGGAGGAAGTGTCTAGACTGGGTCTGCAGGAACACGTCATCCGCCTCTACAGCAAGCAGATCACAACGGCAATCAACGTGCTCCATGAACACGGCATTGTCCACCGTGACATTAAAGGAGCCAATATCTTCCTCACATCATCTGGTTTAATAAAGCTAGGGGACTTCGGCTGCTCCGTGAAGCTAAAGAACAATGCTCAGACGATGCCTGGAGAGGTGAACAGCACACTGGGAACAGCAGCATACATGGCTCCTGAGGTCATCACAAGGGCAAAGGGTGAAGGTCATGGTCGTGCTGCTGATATCTGGAGCCTTGGTTGTGTTCTCATAGAAATGGTCACTGGAAAGAGACCCTGGCACGAATATGAGCATAACTTTCAGATCATGTATAAAGTGGGAATGGGCCACAAACCACCCATTCCTGAAAAGCTGAGCACAGAGGGGAAGGACTTCCTGGCCCATTGCCTAGAGAGTGAACCGAAGCGGCGATGGACCGCCAGTGCCCTGTTGGACCATCCATTTGTCAAGGCATGAACCCGCTCTCACCTTTTATACTATATCCTTAAGCAGATTCACGGGGTCATACATTTGATGGAGATGAGGCACTGCTTTCTGTGCCAAATTCATACAGAATGCCAAATTTCCAATTTGTTACTCAAATTAGATCCAAACAGCACTTCTAGTACATCCACCAACAGGTTACACACTTATAAAAGCATTAAGCCAGACACTGACACAAAAGCTGTGTGGATGCTAAAGCTAGGTTGACAATATCGTTTTCTCATATTTAATGGATCTTCAATTTGATGTACCGTTTAGGCTGTTTTTAGTTGATGCATAA

Function

symbol description
map3k4 Predicted to enable ATP binding activity and protein serine/threonine kinase activity. Predicted to act upstream of or within protein phosphorylation. Is expressed in several structures, including mesoderm; nervous system; neural plate; primordial germ cell; and tail bud. Orthologous to human MAP3K4 (mitogen-activated protein kinase kinase kinase 4).

GO:

id name namespace
GO:0005737 cytoplasm cellular_component

KEGG:

id description
K04428 MAP3K4, MEKK4; mitogen-activated protein kinase kinase kinase 4

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000012_05708007_05735678.mRNA True 4874 mRNA 0.53 25 5708007 5735985

Neighbor

gene id symbol gene type direction distance location
CI01000012_05659039_05669397 NA coding upstream 38423 5659039 ~ 5669584 (+)
CI01000012_05648602_05650699 MYCLA coding upstream 56810 5648602 ~ 5651197 (+)
CI01000012_05565127_05567009 NA coding upstream 140777 5564939 ~ 5567230 (+)
CI01000012_05551775_05553851 NA coding upstream 153644 5551683 ~ 5554363 (+)
CI01000012_05523886_05527548 NA coding upstream 179846 5523886 ~ 5528161 (+)
CI01000012_05748899_05754466 ERLEC1 coding downstream 12914 5748899 ~ 5755254 (+)
CI01000012_05856793_05862577 NA coding downstream 120331 5856316 ~ 5862642 (+)
CI01000012_05909453_05916000 MEMO1 coding downstream 173468 5909453 ~ 5916174 (+)
CI01000012_05923216_05928055 SRD5A2B coding downstream 186400 5922385 ~ 5929186 (+)
CI01000012_05946986_05984551 SLX4IP coding downstream 211001 5946986 ~ 5985959 (+)
G71607 NA non-coding upstream 34750 5673042 ~ 5673257 (+)
G71606 NA non-coding upstream 35797 5671754 ~ 5672210 (+)
G71599 NA non-coding upstream 70336 5637368 ~ 5637671 (+)
G71562 NA non-coding upstream 96402 5608850 ~ 5611605 (+)
G71559 NA non-coding upstream 134779 5572817 ~ 5573228 (+)
G71595 NA non-coding downstream 3031 5739016 ~ 5739684 (+)
G71585 NA non-coding downstream 30090 5766075 ~ 5768769 (+)
G71618 NA non-coding downstream 69816 5805801 ~ 5806063 (+)
G71619 NA non-coding downstream 70536 5806521 ~ 5806785 (+)
G71622 NA non-coding downstream 74052 5810037 ~ 5811227 (+)
G71548 NA other upstream 146574 5550493 ~ 5561433 (+)
G71221 NA other upstream 167551 5538525 ~ 5540456 (+)
G71218 NA other upstream 169623 5535852 ~ 5538384 (+)
G71199 NA other upstream 291222 5413250 ~ 5416785 (+)
CI01000012_05177587_05180517 SRSF5A other upstream 527037 5176895 ~ 5180970 (+)
G71623 NA other downstream 77532 5813517 ~ 5816605 (+)
CI01000012_07806089_07811902 BEND3 other downstream 2070118 7805248 ~ 7811902 (+)
G73578 NA other downstream 2630821 8366806 ~ 8367627 (+)
CI01000012_10223957_10235955 NA other downstream 4485970 10223697 ~ 10236276 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location