G71606


Basic Information

Item Value
gene id G71606
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000012
NCBI id null
chromosome length 13770000
location 5671754 ~ 5672210 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU81617
CCCATATAATTTTTTCCATCAATTGCAAAATTGATTTTTTTTACAATATTCTCTCTATATTATAATGTTTTTACTTAAGTAATGATTCATAAAAAATGAAAACCAAAACTAGTGTGGAAAGATTGTTAACATTAGAGATAAGGAAGCTGCAAACGGTTTTAATATATTTCCAAAAATTAATGTACAAATGATTCTGTACCTCTTCCGGGTTAAAATGGATGCAAATGCAATAGGTTTAAAATGTTAAGTATTCAAGGTTGATTGGGACACCTTTTGCTTTGTGCTTTTGCAAGAGATATGTGATGTTTTGCATGCTGTGTAGAGATTTGAGAAATGGAGCCATAGTTTCAAAAACTGTGTAAACAATTTGAAAAAACTGTATAGCGCTGAATGTGTGATGAGGGGATGTGAATCAGTGACCTTTTTGTTTCTCTACAACAACACAAGTGGATAAACT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU81617 True 457 lncRNA 0.31 1 5671754 5672210

Neighbor

gene id symbol gene type direction distance location
CI01000012_05659039_05669397 NA coding upstream 2170 5659039 ~ 5669584 (+)
CI01000012_05648602_05650699 MYCLA coding upstream 20557 5648602 ~ 5651197 (+)
CI01000012_05565127_05567009 NA coding upstream 104524 5564939 ~ 5567230 (+)
CI01000012_05551775_05553851 NA coding upstream 117391 5551683 ~ 5554363 (+)
CI01000012_05523886_05527548 NA coding upstream 143593 5523886 ~ 5528161 (+)
CI01000012_05708007_05735678 MAP3K4 coding downstream 35797 5708007 ~ 5735985 (+)
CI01000012_05748899_05754466 ERLEC1 coding downstream 76689 5748899 ~ 5755254 (+)
CI01000012_05856793_05862577 NA coding downstream 184106 5856316 ~ 5862642 (+)
CI01000012_05909453_05916000 MEMO1 coding downstream 237243 5909453 ~ 5916174 (+)
CI01000012_05923216_05928055 SRD5A2B coding downstream 250175 5922385 ~ 5929186 (+)
G71599 NA non-coding upstream 34083 5637368 ~ 5637671 (+)
G71562 NA non-coding upstream 60149 5608850 ~ 5611605 (+)
G71559 NA non-coding upstream 98526 5572817 ~ 5573228 (+)
G71548 NA non-coding upstream 110321 5550493 ~ 5561433 (+)
G71225 NA non-coding upstream 260238 5409222 ~ 5411516 (+)
G71607 NA non-coding downstream 832 5673042 ~ 5673257 (+)
G71595 NA non-coding downstream 66806 5739016 ~ 5739684 (+)
G71585 NA non-coding downstream 93865 5766075 ~ 5768769 (+)
G71618 NA non-coding downstream 133591 5805801 ~ 5806063 (+)
G71619 NA non-coding downstream 134311 5806521 ~ 5806785 (+)
G71221 NA other upstream 131298 5538525 ~ 5540456 (+)
G71218 NA other upstream 133370 5535852 ~ 5538384 (+)
G71199 NA other upstream 254969 5413250 ~ 5416785 (+)
CI01000012_05177587_05180517 SRSF5A other upstream 490784 5176895 ~ 5180970 (+)
G71623 NA other downstream 141307 5813517 ~ 5816605 (+)
CI01000012_07806089_07811902 BEND3 other downstream 2133893 7805248 ~ 7811902 (+)
G73578 NA other downstream 2694596 8366806 ~ 8367627 (+)
CI01000012_10223957_10235955 NA other downstream 4549745 10223697 ~ 10236276 (+)

Expression


Co-expression Network