XLOC_007598 (LO018568.1)


Basic Information

Item Value
gene id XLOC_007598
gene name LO018568.1
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007125.7
NCBI id CM002898.2
chromosome length 52660232
location 669982 ~ 677801 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00014899
TCTTCCAGTCTCTTCTTTGAAATATGTTTCAcctCTCACTGTGCTCAGGGTCGATTCGCACACAAGTTGTTGAACGATCTGATGGAGGATTACTCCAGCGCTCTGCGGCCGGTGGACGACACTGACAAATCCCTGAACGTCACACTGCAGGTCACACTGTCCCAGATCAAAGACATGgacgaGAGGAACCAGGTGTTAATCGCGTACCTGTGGATCAGGCAGGTGTGGCACGACGCTCACCTGAAGTGGAGTAAGGAGGATTATGACGGTCTGGAGGTGATCCGCATTCCCAGCAGCCTCATCTGGAGACCCGACCTGGTGCTGTATAACAAgGCGGATGATGATTTCTCAGGCCCGGTGGACACTAATGTCGTTCTGCGCTACACCGGCGAGATCACGTGGGACGCTCCGGCCATCACCAAGAGCTCCTGTGTGGTGGATGTTTCCTACTTTCCCTTCGACAGCCAGCAGTGCAACCTCACGTTCGGCTCCTGGACATACAACGGCAACCAGGTGGACATCGCAATGGGCAGTGTCAGCGGCGACCTCTCGGACTTCGTGGAGAACGTGGAGTGGGAATGCCACGGGATGCCGGCTACCAAAAACGTGATCATGTACGGCTGCTGCTCGGACCCGTACCCCGACATCACCTACACTGTGCTGCTGCAGCGCCGCAGCTCCTTCTACATCATCAACCTGCTGCTGCCCTGCTTCCTCATCTCCTTCCTGGCGCCGCTCAGCTTCTACCTGCCCGCAGACTCCGGGGAGAAGGTCTCGCTGGGGGTCACCGTGCTGCTGGCGCTGACTGTGTTCCAGATGATGGTGGCGGAGAGCATGCCTCCCTCTGAGAGTGTTCCTCTCATTGCTAAATACTACATAGCGACGATGACCATGATCACGGCGTCCACCGCTCTGACCATCTTCATCATGAACATTCATTTCTGCGGCGCAGAGGCCAAACCGGTGCCGTACTGGGCCAAAGTGCTCATCATCGACTACATGTCCAAGATCTTCTTCGTCTATGAGGTTGGAGAGAGCTGTGCGTCTCCGTTCGGACAGGCGGAGGAGTCAGAGTCCTTCCACAGTCAGAATCACCACCGAAAACACAAGCTTCATCACCCTAAAGGGAAAATATCAGGATCTCCGCCACCCTGCTGCCCGGAGGACCACAAATCCCCCTTCGTCCTGGGCTGCGAGAGCTGTGTTTACTGTGGTTTTCGCTCTGGAAATCTGGCCTGCGACACAAAGCTGCTCCGCAATGTTGAATACATCGCCAACTGCTTCCGCGAGCAGAAGACCACCGCCCTGAAGGTGGCCGAGTGGAAGAAAGTGGCCAAGGTGATGGACCGATTCTTCATGTGGATATTTTTCATCATGGTCTTCCTCATGAGTATCCTCATCATCGGAAAAGCACCAACAACCAACAACGACATTTGA

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000099181

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00014899 True 1437 mRNA 0.55 7 669982 677801

Neighbor

gene id symbol gene type direction distance location
XLOC_007597 NA coding downstream 5862 634038 ~ 664120 (-)
XLOC_007596 fgf2 coding downstream 97240 567216 ~ 572742 (-)
XLOC_007595 CABZ01085878.1 coding downstream 117946 540157 ~ 552036 (-)
XLOC_007594 NA coding downstream 161851 506778 ~ 508131 (-)
XLOC_007593 spry1 coding downstream 171003 497695 ~ 498979 (-)
XLOC_007599 ube2ka coding upstream 6146 683947 ~ 689841 (-)
XLOC_007600 si:zfos-741a10.3 coding upstream 21428 699229 ~ 706345 (-)
XLOC_007601 tlr1 coding upstream 54063 731864 ~ 736575 (-)
XLOC_007602 trim35-27 coding upstream 79634 757435 ~ 763744 (-)
XLOC_007603 slc34a1a coding upstream 156818 834619 ~ 858987 (-)
XLOC_007639 CU855896.3 misc upstream 1729144 2406945 ~ 2407072 (-)
XLOC_007640 CU855896.2 misc upstream 1729527 2407328 ~ 2407431 (-)
XLOC_007641 CU855896.1 misc upstream 1729935 2407736 ~ 2407840 (-)
XLOC_007604 CU928046.1 non-coding upstream 185230 863031 ~ 899192 (-)
XLOC_007605 NA non-coding upstream 255202 933003 ~ 970853 (-)
XLOC_007607 NA non-coding upstream 325247 1003048 ~ 1003398 (-)
XLOC_007608 NA non-coding upstream 380543 1058344 ~ 1059534 (-)
XLOC_007622 CABZ01029590.1 non-coding upstream 1017923 1695724 ~ 1695842 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000046_00557959_00566058 CHRNA9 coding CI01000046 null 555539 ~ 566877 (-)
bowfin (Amia calva) AMCG00017827 LOC107660492,LOC107757584,LOC107700259 coding CM030131.1 CM030131.1 24591017 ~ 24596789 (-)