XLOC_000760


Basic Information

Item Value
gene id XLOC_000760
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007112.7
NCBI id CM002885.2
chromosome length 59578282
location 55714918 ~ 55729126 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00003235
tggcctctagCACCTGTCAATAGAGCATGTTTAGAGGTCAGACGAGTGAGGTTTACATGCATATGAGATTTTGTGTAAGCACAACGATGAGCCtcttcatctgaacacacatTAGACTGCATGCCAGAATAGTTTCATTGCTCAAATGTTGATAAACTAAAGGCATCATCAGCTGCTTCGCTATCTGTTTACAAAAAGAGCTGGCGAAGAGGGTGGAGTCCATGACTTGCTGAAGAAGCAGCCGTTTATGTATAAACCCTCACTAATTTCAAACAGGTCGATTATGGCACAttcaaacacttaaaaaaaacaagctgcaTGTTTACTTTCAACTTGTCTGAGCTGGCAGACACAGCAGAAAC

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00003235 True 362 lncRNA 0.42 2 55714918 55729126

Neighbor

gene id symbol gene type direction distance location
XLOC_000759 adgre6 coding upstream 7582 55703120 ~ 55707336 (+)
XLOC_000758 NA coding upstream 35471 55678912 ~ 55679447 (+)
XLOC_000757 adgre8 coding upstream 46528 55662491 ~ 55668390 (+)
XLOC_000756 adgre7 coding upstream 68505 55643198 ~ 55646413 (+)
XLOC_000755 adgre18 coding upstream 97763 55608520 ~ 55617155 (+)
XLOC_000763 adgre10 coding downstream 1079 55730205 ~ 55747003 (+)
XLOC_000764 tecrb coding downstream 23467 55752593 ~ 55777154 (+)
XLOC_000765 crb3b coding downstream 451290 56180416 ~ 56184928 (+)
XLOC_000766 c3a.2 coding downstream 500548 56229674 ~ 56266731 (+)
XLOC_000767 c3a.3 coding downstream 545487 56274613 ~ 56320569 (+)
XLOC_000745 NA non-coding upstream 237783 55370138 ~ 55477135 (+)
XLOC_000768 NA non-coding downstream 687512 56416638 ~ 56556305 (+)
XLOC_000772 NA non-coding downstream 832100 56561226 ~ 56604352 (+)
XLOC_000773 NA non-coding downstream 833701 56562827 ~ 56564352 (+)
XLOC_000774 NA non-coding downstream 840388 56569514 ~ 56603810 (+)
XLOC_000775 NA non-coding downstream 931071 56660197 ~ 56662651 (+)
XLOC_000741 NA non-coding upstream 135482 55314474 ~ 55579436 (+)
XLOC_000748 NA non-coding upstream 275643 55437572 ~ 55439275 (+)
XLOC_000747 NA non-coding upstream 321886 55392380 ~ 55393032 (+)

Expression


Co-expression Network