G181144


Basic Information

Item Value
gene id G181144
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035916.1
NCBI id CM008319.1
chromosome length 36262418
location 34551475 ~ 34624427 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU245332
cacttactcttggtcttgccatgtgggcagaaaatgtccttgtgatgtcacttcctttgtgccagtagacagtaatatttttaactctttctctgcaggtaaaatatggtaacagggttgagcgcatgttgtgggacacaacttaacagcataaaaactgtaacatgcaaaacaatgtagaccaaagaagttgttttcatgagtaaaggagatgcagatcaacaatatacaagaggaagtcatttatttaga

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU245332 True 252 lncRNA 0.38 2 34551475 34624427

Neighbor

gene id symbol gene type direction distance location
LOC103024324 kl coding upstream 20782 34513238 ~ 34530693 (+)
LOC103026520 LOC108423747 coding upstream 427804 34008921 ~ 34123671 (+)
mis18a NA coding upstream 583824 33960956 ~ 33967651 (+)
c20h21orf59 c10h21orf59,cunh21orf59,LOC103033817,LOC107691672,LOC105907446 coding upstream 632734 33911224 ~ 33918741 (+)
synj1 NA coding upstream 645484 33858676 ~ 33905991 (+)
nbea nbeaa,nbea,LOC107691681 coding downstream 151287 34775714 ~ 35070323 (+)
sertm1 sertm1 coding downstream 598261 35222688 ~ 35232948 (+)
rfxap rfxap coding downstream 609413 35233840 ~ 35239425 (+)
exosc8 exosc8,LOC107577834,LOC107697412 coding downstream 646531 35270958 ~ 35276627 (+)
LOC111195094 NA coding downstream 735306 35359733 ~ 35363752 (+)
G181137 NA non-coding upstream 7969 34543295 ~ 34543506 (+)
G181135 NA non-coding upstream 8602 34542455 ~ 34542873 (+)
G181057 NA non-coding upstream 126969 34423236 ~ 34424506 (+)
G181056 NA non-coding upstream 136059 34412807 ~ 34415416 (+)
G181036 NA non-coding upstream 159706 34310125 ~ 34391769 (+)
G181158 NA non-coding downstream 6792 34631219 ~ 34631422 (+)
G181171 NA non-coding downstream 159563 34783990 ~ 34932205 (+)
G181173 NA non-coding downstream 170982 34795409 ~ 34795940 (+)
G181179 NA non-coding downstream 257738 34882165 ~ 34914513 (+)
G181182 NA non-coding downstream 279914 34904341 ~ 34918166 (+)
LOC103024954 LOC108423745 other upstream 44151 34334576 ~ 34507324 (+)
LOC103026201 LOC108277347,LOC108423746,LOC106604019 other upstream 222505 34172924 ~ 34328970 (+)
ufm1 ufm1,LOC107701138 other upstream 1483543 33050242 ~ 33067932 (+)
G180460 cct8,LOC100304907,LOC107693911,LOC107701129 other upstream 2277677 32264998 ~ 32273798 (+)
G180266 NA other upstream 3117566 31433198 ~ 31433909 (+)
nsun5 nsun5,LOC102793237,LOC107686168 other downstream 768094 35392521 ~ 35403624 (+)
LOC107197592 NA other downstream 976056 35600483 ~ 35607593 (+)
LOC103044041 NA other downstream 1060577 35685004 ~ 35702995 (+)
LOC103024766 zdhhc20a,LOC107589301,LOC107743391,LOC107686182,LOC107728865,LOC107697429,LOC108411113,LOC108276908 other downstream 1191608 35816035 ~ 35842871 (+)
G181734 NA other downstream 1582140 36206567 ~ 36209854 (+)

Expression


Co-expression Network