G181036


Basic Information

Item Value
gene id G181036
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035916.1
NCBI id CM008319.1
chromosome length 36262418
location 34310125 ~ 34391769 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU245200
ttaaaaatgatgagtttctttgattttaccaaattaaaaacctctggaatgtaatcaagaggaagatggatgatcacaaaccatcaaaccaccaaactgaactgcttgaatttttgcaccaggagtaaagcagcataaagttatccaaaagcagtgtgtaagactggtggaggagaacatgatgccaagatgcatgaaaaaaactgtgattaaaaaccagggttattccaccaaatattgatttctgaacgaatatgaacttgtttttttctttgcattattt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU245200 True 283 lncRNA 0.34 2 34310125 34391769

Neighbor

gene id symbol gene type direction distance location
LOC103026520 LOC108423747 coding upstream 186454 34008921 ~ 34123671 (+)
mis18a NA coding upstream 342474 33960956 ~ 33967651 (+)
c20h21orf59 c10h21orf59,cunh21orf59,LOC103033817,LOC107691672,LOC105907446 coding upstream 391384 33911224 ~ 33918741 (+)
synj1 NA coding upstream 404134 33858676 ~ 33905991 (+)
LOC107197579 trim47,LOC108423837,LOC107701143,LOC107718738,LOC107557227,LOC107720633 coding upstream 1012930 33286435 ~ 33297195 (+)
LOC103024324 kl coding downstream 121469 34513238 ~ 34530693 (+)
stard13 stard13,LOC108415386 coding downstream 153994 34545763 ~ 34726721 (+)
nbea nbeaa,nbea,LOC107691681 coding downstream 383945 34775714 ~ 35070323 (+)
sertm1 sertm1 coding downstream 830919 35222688 ~ 35232948 (+)
rfxap rfxap coding downstream 842071 35233840 ~ 35239425 (+)
G181033 NA non-coding upstream 41312 34267225 ~ 34268813 (+)
G181027 NA non-coding upstream 59658 34250007 ~ 34250467 (+)
G180943 NA non-coding upstream 202530 34106499 ~ 34107595 (+)
G180937 NA non-coding upstream 266710 34042618 ~ 34043415 (+)
G180931 NA non-coding upstream 303311 34005963 ~ 34006814 (+)
G181056 NA non-coding downstream 21038 34412807 ~ 34415416 (+)
G181057 NA non-coding downstream 31467 34423236 ~ 34424506 (+)
G181135 NA non-coding downstream 150686 34542455 ~ 34542873 (+)
G181137 NA non-coding downstream 151526 34543295 ~ 34543506 (+)
G181144 NA non-coding downstream 159706 34551475 ~ 34624427 (+)
ufm1 ufm1,LOC107701138 other upstream 1242193 33050242 ~ 33067932 (+)
G180460 cct8,LOC100304907,LOC107693911,LOC107701129 other upstream 2036327 32264998 ~ 32273798 (+)
G180266 NA other upstream 2876216 31433198 ~ 31433909 (+)
G180235 erg other upstream 3159030 31139344 ~ 31151095 (+)
LOC103038954 zgc:101846,LOC106525086,LOC108416226,LOC101161532 other upstream 6784684 27524302 ~ 27525441 (+)
nsun5 nsun5,LOC102793237,LOC107686168 other downstream 1000752 35392521 ~ 35403624 (+)
LOC107197592 NA other downstream 1208714 35600483 ~ 35607593 (+)
LOC103044041 NA other downstream 1293235 35685004 ~ 35702995 (+)
LOC103024766 zdhhc20a,LOC107589301,LOC107743391,LOC107686182,LOC107728865,LOC107697429,LOC108411113,LOC108276908 other downstream 1424266 35816035 ~ 35842871 (+)
G181734 NA other downstream 1814798 36206567 ~ 36209854 (+)

Expression


Co-expression Network