trnae-cuc_20


Basic Information

Item Value
gene id trnae-cuc_20
gene name NA
gene type misc
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035918.1
NCBI id CM008321.1
chromosome length 32506130
location 31174807 ~ 31174878 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>trnae-cuc_20
TCCCTGGTGGTCTAGTGGTTAGGATTCGGCGCTCTCACCGCCGCggcccgggttcgattcccggtcaGGGAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
trnae-cuc_20 True 72 tRNA 0.65 1 31174807 31174878

Neighbor

gene id symbol gene type direction distance location
gnl3 NA coding downstream 318258 30847297 ~ 30856549 (-)
LOC103040946 LOC108435972,LOC107714490,LOC107566450,LOC108254900 coding downstream 372299 30729235 ~ 30802508 (-)
LOC103043315 NA coding downstream 454562 30718976 ~ 30720245 (-)
ptprg ptprg,ptprga,LOC107752167,LOC106583020 coding downstream 1415182 29302534 ~ 29759625 (-)
cse1l cse1l,LOC107750990,LOC107699361 coding downstream 1883204 29280150 ~ 29291603 (-)
sfmbt1 sfmbt1 coding upstream 20944 31195822 ~ 31230829 (-)
LOC103036366 prkcd,prkcdb,LOC108435819,LOC107696837,LOC107728641,LOC107656045,LOC107600299 coding upstream 63593 31238471 ~ 31287104 (-)
LOC103035852 LOC108435806 coding upstream 130689 31305567 ~ 31370546 (-)
fezf2 fezf2,fezf1,LOC108247338,LOC106530279 coding upstream 256013 31430891 ~ 31435487 (-)
LOC107197084 NA coding upstream 564993 31739871 ~ 31747170 (-)
G193959 itih3,LOC108435863,LOC105912272,LOC101062864,LOC101070262 non-coding downstream 5924 31137974 ~ 31168883 (-)
G193962 NA non-coding downstream 23565 31148645 ~ 31151242 (-)
G193961 itih3a,itih3,LOC108435863,LOC108435869 non-coding downstream 28870 31144331 ~ 31145937 (-)
G193891 NA non-coding downstream 155581 31018747 ~ 31019226 (-)
G193889 NA non-coding downstream 163264 31011287 ~ 31011543 (-)
G193964 NA non-coding upstream 19286 31194164 ~ 31194838 (-)
G193968 NA non-coding upstream 126602 31301480 ~ 31304310 (-)
G193978 NA non-coding upstream 237041 31411919 ~ 31414467 (-)
G193980 NA non-coding upstream 242871 31417749 ~ 31418526 (-)
G194034 NA non-coding upstream 321124 31496002 ~ 31497236 (-)
spcs1 spcs1,LOC107680421,LOC107744856 other downstream 343850 30809794 ~ 30830957 (-)
G193737 NA other downstream 994681 30165761 ~ 30180126 (-)
G193541 NA other downstream 2576169 28597555 ~ 28598638 (-)
LOC111195343 LOC108434908 other downstream 2588585 28576107 ~ 28586222 (-)
LOC111195422 si:dkey-33m11.6,LOC108411515,LOC108255079,LOC107572850,LOC107714486,LOC107680422 other downstream 2961737 28194379 ~ 28213070 (-)
cadps cadps,LOC107549847 other upstream 275925 31450803 ~ 31654210 (-)

Expression


Co-expression Network