G74686


Basic Information

Item Value
gene id G74686
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000012
NCBI id null
chromosome length 13770000
location 8337857 ~ 8338934 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU85200
CGTGTAAGACTTCATTTACAAATCAAATTACAGCGGTACAGAAGTATGAATACACAAGGTGACAAAACATCGCTGTAGCAACGCTGCAACATTTCAAAAACATCATAAAAACGTTCTCCAGAGAAAAGTAAGGCACCGACTGAATCGGTGGGTATATAGGCAATTCTTTTAAAGCATTTTGAGAATAAAGTGAAACAGCAAAATTAAAAGAAGAATCGGAAATATAAACATATACACAATGTTCAGAACATGTATAGAATGTTTAAAACTGGTTTTAGTTGGAACACACCTTGTGAAAGTTAAAGGTGTCAGTGGCATGTTACACCTGAATCATGTTGGGATACATAGAGAGCACAGGGAGAGTGTGCTATGCTTCTTGTGCAATAAATCCTAAAACATTTTTTATGCTGGTGTTTATTGGTTCTGTAAATCAAACAGAACCCCTGTCACTGAGTTCAGAATAAGATGGGTTCCTAAAATGACCATCACTGGTCTGTCGTCTTCTCACATACAAACTTCTGCAGAGCTGTGGAAAAGCCTTATGGGAGAGGAGCTGTGACAGCTGTGAGCTTTTATCAGGCACTGGTAGGACTCATTCACACACATTAAACATTATAAGAGAAAATGCTGTTTCATCTGTCAAGCTGTAAAGACACGACTGTCCTTAAAGACACCTCAGTCAGATCAGCAGAGCGTTTGCTTTGCATACCAGTGTCTGTTCAGGCTAAAGTAGTTTGAGAATTCTGGAACAGGAATTATAAAATGTTTTAGTTCCTAGTAAAATGAAAATGCTGTCATTATTTACTAAGTCTTGTGTTGTTCACACCCCATATTTATTTTTGTTTTTCAGTTAAATATGATATTTTATACACAATAAAAGCGTGGGCAAAACAAACAAACAACATTTTTTTTAAGCATTACAAAAAAAGTAAATGCCATATGTTCTATATTCCAAGTCTTTTAAAGACATACACTATTGTAAAAGTTTGGTGTCTGTAATTTTTTGTTTGTTTGTTTTAAGAAATTAATACTACTCAGCAAAGATGCATTAAACTGATCAAAAGCTGAGCAAATACTT

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU85200 True 1078 lncRNA 0.35 1 8337857 8338934

Neighbor

gene id symbol gene type direction distance location
CI01000012_08247043_08252830 NA coding downstream 84899 8246417 ~ 8252958 (-)
CI01000012_08156754_08159438 OSR1 coding downstream 178419 8156069 ~ 8159438 (-)
CI01000012_07956050_07959414 NA coding downstream 378443 7955987 ~ 7959414 (-)
CI01000012_07938822_07940632 NA coding downstream 396812 7938814 ~ 7941045 (-)
CI01000012_07930029_07934648 5NT1A, NT5C1BA coding downstream 402976 7929292 ~ 7934881 (-)
CI01000012_08376626_08388293 HIF1AA coding upstream 37684 8376618 ~ 8388293 (-)
CI01000012_08399430_08416750 PRKCHA coding upstream 58832 8397766 ~ 8417291 (-)
CI01000012_08423495_08432094 SLC38A6 coding upstream 83870 8422804 ~ 8432094 (-)
CI01000012_08445692_08459897 MNAT1 coding upstream 106724 8445658 ~ 8459897 (-)
CI01000012_08489570_08491016 SIX6, SIX6A, SIX6B, SIX6.L coding upstream 150164 8489098 ~ 8492326 (-)
G74666 NA non-coding downstream 57569 8280051 ~ 8280288 (-)
G74664 NA non-coding downstream 62924 8274728 ~ 8274933 (-)
G74663 NA non-coding downstream 63371 8274272 ~ 8274486 (-)
G74662 NA non-coding downstream 63605 8274024 ~ 8274252 (-)
G74661 NA non-coding downstream 63901 8273363 ~ 8273956 (-)
G74687 NA non-coding upstream 1170 8340104 ~ 8340325 (-)
G74696 NA non-coding upstream 17133 8356067 ~ 8356638 (-)
G74695 NA non-coding upstream 17856 8356790 ~ 8357499 (-)
G74698 NA non-coding upstream 19614 8358548 ~ 8358774 (-)
G74702 NA non-coding upstream 29534 8368468 ~ 8368999 (-)
G74648 NA other downstream 72203 8264329 ~ 8265654 (-)
CI01000012_07356934_07358497 NA other downstream 979312 7356863 ~ 7358612 (-)
G72629 NA other downstream 2190363 6147011 ~ 6147494 (-)
G72294 NA other downstream 2872000 5462840 ~ 5465857 (-)
CI01000012_05414096_05416676 TTC9 other downstream 2921077 5413369 ~ 5416780 (-)
G74701 NA other upstream 28085 8367019 ~ 8367643 (-)
CI01000012_09068458_09070536 NA other upstream 728972 9067906 ~ 9070765 (-)
CI01000012_09071892_09073410 NA other upstream 732437 9071371 ~ 9073457 (-)
CI01000012_09082056_09083285 NA other upstream 743802 9081877 ~ 9083489 (-)
CI01000012_09400481_09401810 EIF4EBP2 other upstream 1059142 9398076 ~ 9402378 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
tiger barb (Puntius tetrazona) G93006 syt14a,syt14,LOC107668771,LOC107757094,LOC107675522,LOC107548616 non-coding NC_056711.1 CM032080.1 11751939 ~ 11758609 (+)