XLOC_007671


Basic Information

Item Value
gene id XLOC_007671
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007125.7
NCBI id CM002898.2
chromosome length 52660232
location 4832678 ~ 4844445 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00016343
GGCTTTGAGCTGCGTTCTGAAGAAAACAGGCTCTCGTGTGAAGACTAAAGAAGAGCGAGCGTCACTTTAAGAGGCGAGAAGAAAATCCTGCTGTCAAAACACAGCGGCATAAAAGGCAAACCAAATGGCCGCGTGAAACATAAGACTGTAAACATCTGATGCTCTGATAAGGAGCTGAATAGCGCAGGAGACTCTCCTGAGAGACGCCGTAAGAAGATCCTCCCGTCAAAACGACCACCCATGAAAGACCCAGCGCATTCACTCATCCTATCATTATGTAATCCTGATGGCTTTGTTCtcgattctattctattcttatACTTGCGTTTGTCTACAGCActtgttattttacagtgtaaacaacGAGCGAGTCGCATAGTGTTTTGGTGGCTGCAGGATTGCGTCTTTCATGGGCAATAGATCACCGCGCATCGGGCTTAAATGAATCCTGATGGAAACGTCTCGACTGTTTTAGCTCTCgagctgaaaaaaaaagtgatcacACGGCCCAGCTGCTAGATGagatggttatatatatataaaaaaagaaaacctgaATAAAACTGACACTGCAGCACCACCAGATGTTAAGTGACGGTACAGCATTAGTGAAACAGATCACAAGCTGGCCATCCTTGAAGACATCAAAAAGACATTTTTCATTTCATCAGGTAAGCACGCTAGGTTTAGCTTATTAGgctgaaattactttaaaataaaagtgtgtgtgtatattaattTTATCATGATGCATATTACATATACAAATCAAACATTAGTCAGATAAAAATCACTACAACAATAATGTACAGCTTGATATTCCTCTTCCTCTTCTGCTTGAGTAATGTGATGTATTCTTTAtctaatgccatgtcagcaacaaaggctattttcatggaAAGAACATGTCAAtactaaatatacaattaaaaaacaacaaacagatGAATACAAAAATTAGACAAGATTTttagtgttaatacatgataagaaTTATAAACATTTTCCTG

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00016343 True 1010 lncRNA 0.38 2 4832678 4844445

Neighbor

gene id symbol gene type direction distance location
XLOC_007670 NA coding downstream 35419 4796748 ~ 4797259 (-)
XLOC_007669 LO018256.1 coding downstream 125506 4692749 ~ 4707172 (-)
XLOC_007668 gabra4 coding downstream 150564 4610439 ~ 4682114 (-)
XLOC_007667 NA coding downstream 224921 4604387 ~ 4607757 (-)
XLOC_007666 NA coding downstream 232742 4596503 ~ 4599936 (-)
XLOC_007672 NA coding upstream 17495 4861940 ~ 4884445 (-)
XLOC_007673 BX510929.1 coding upstream 107669 4952114 ~ 5112791 (-)
XLOC_007674 NA coding upstream 482611 5327056 ~ 5329176 (-)
XLOC_007675 pcgf1 coding upstream 550185 5394630 ~ 5407555 (-)
XLOC_007676 fgf24 coding upstream 662538 5506983 ~ 5546497 (-)
XLOC_007641 CU855896.1 misc downstream 2424838 2407736 ~ 2407840 (-)
XLOC_007640 CU855896.2 misc downstream 2425247 2407328 ~ 2407431 (-)
XLOC_007639 CU855896.3 misc downstream 2425606 2406945 ~ 2407072 (-)
XLOC_007663 NA non-coding downstream 544683 4287253 ~ 4287995 (-)
XLOC_007677 BX276088.1 non-coding upstream 716310 5560755 ~ 5563191 (-)
XLOC_007682 FP103005.3 non-coding upstream 1310929 6155374 ~ 6158751 (-)

Expression


Co-expression Network