XLOC_007669 (LO018256.1)



Basic Information


Item Value
gene id XLOC_007669
gene name LO018256.1
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007125.7
NCBI id CM002898.2
chromosome length 52660232
location 4692749 ~ 4707172 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00015047
GATGCGCTGGATTTTCAATTTGTGCTGTGTGATCCGGAGATGTACAGTACTGTAAGCACGGTGTGTTTGACCTTCATACAAACATCTGGCCTCTCTGGGTATTATGATGTACCAGGATGAGGGCATGTCACACAACCTGTCCATGTTGGCATCTGCCTCGTTTGGCTGCTTGCAGATCAGTTGTGCCAAAACACCATAGAGTTTGatcgcacacacacattttgacGTCAACAGCAAAACATATGGGAGATATTTTTCCCTCCTGCCTTTTAGATTCTTC
>TCONS_00015048
GATGCGCTGGATTTTCAATTTGTGCTGTGTGATCCGGAGATGTACAGTACTGTAAGCACGGTGTGTTTGACCTTCATACAAACATCTGGCCTCTCTGGGTATTATGATGTACCAGcagGCCTTCTCCCTCCGCTTTTGTGCGTTCGCCTGAATATTGCAGCAGA

Function


GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000117433

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00015047 False 280 lncRNA 0.45 2 4692749 4707172
TCONS_00015048 True 164 lncRNA 0.48 2 4702323 4707172

Neighbor


gene id symbol gene type direction distance location
XLOC_007668 gabra4 coding downstream 10635 4610439 ~ 4682114 (-)
XLOC_007667 NA coding downstream 84992 4604387 ~ 4607757 (-)
XLOC_007666 NA coding downstream 92813 4596503 ~ 4599936 (-)
XLOC_007665 LO018287.1 coding downstream 135838 4478416 ~ 4556911 (-)
XLOC_007664 guf1 coding downstream 370875 4295933 ~ 4321874 (-)
XLOC_007670 NA coding upstream 89576 4796748 ~ 4797259 (-)
XLOC_007671 NA coding upstream 125506 4832678 ~ 4844445 (-)
XLOC_007672 NA coding upstream 154768 4861940 ~ 4884445 (-)
XLOC_007673 BX510929.1 coding upstream 244942 4952114 ~ 5112791 (-)
XLOC_007674 NA coding upstream 619884 5327056 ~ 5329176 (-)
XLOC_007641 CU855896.1 misc downstream 2284909 2407736 ~ 2407840 (-)
XLOC_007640 CU855896.2 misc downstream 2285318 2407328 ~ 2407431 (-)
XLOC_007639 CU855896.3 misc downstream 2285677 2406945 ~ 2407072 (-)
XLOC_007663 NA non-coding downstream 404754 4287253 ~ 4287995 (-)
XLOC_007660 BX088718.2 non-coding downstream 529328 4160855 ~ 4163421 (-)
XLOC_007654 NA non-coding downstream 1311446 3362794 ~ 3381303 (-)

Expression



Co-expression Network