XLOC_007666


Basic Information

Item Value
gene id XLOC_007666
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007125.7
NCBI id CM002898.2
chromosome length 52660232
location 4596503 ~ 4599936 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00016026
aagccgaacaatcacagagcttgcgctacgcatcgttgcaatgtgtagttacatttttgagaggtgcgcgtcagcgatGCTGACATCCATGGCATAGGGCTATGTGTCAACGTGTAGGCTGCGCTATAGCATatgtgtgcgcttgacgcagaagtataaatctaaATCAGCTTTAACACATACAACACTGTAGCTATATTTGCATTGCTATTATACTAATTGTTtgtatcttttattttatttacttatttttcgtTGCAGAACTTTCGGAATTGTCTTAAAATCTGACCAAAATCTAGCATCCCtgacatttagattttgtgttgAAATATGAGCAATTCTTTGAGGGATGATGTTCTTCTGTGGCATCACACTGTAAAACCCTACAAACTCAGAGAAAAGAGGCTTGCTTCTTAAACTCAGTTTCTCTCTGTCCTTTCTTGAATCCTCGAATCATATTGTGATCATTCGTTTTTCTAATTATTGCTTATTATCGCAGAGAAAAATGTGTTTTCTAAAGAGATTTGGAGGGGAGAAAGAGCAGCAGTGATTTGTATTGAAGCCTCGAGCGGCCGGAAACTGTCTTGACTGATAAACTCCACTATAACATCATGTAGAGCAGGAGACAGAAAGACGGAGAGATTGTGTTTATCGTGTTGGCGCTGATAAGAACAAATATCCATAATCTTCCTCTGGATGGAGCCCAGAAACAAGAGAGATGTAACGAGAAGAGAGGCAAGACAACATGGACTGAGTGGGAAAGGCATTTCTTTTGGATTCATTTGTCAAGTTCCAGAAATCATGCCGCTTCCTCTGTACATATAACTCATGTTAGCAACTGAATGTCTGTTTATAAAAATGAACAACACATACAACCTGTGTTTTGTagtgtgtatatattattattattataaatattcttTACTTACTGCCCTATGCAAGAAATCTCCCTCAGAACAGAGGTGTCCGTGCTTTCCCAGTGATGAGGTCATCGCTCACGGTCCAATGAGAGAAGAGaatcaaaacataaacaaatatacatCTATCACGTATTAATCGCTCTTGTGTCTTTAAAAGATCTTTTTGGATGCGTCTGAAATCGCCTACTCCAGCAGATATTTGAGTTTACTATATGACCTTCAGGAAAG

Function

GO:

id name namespace
GO:0031224 intrinsic component of membrane cellular_component
GO:0046906 tetrapyrrole binding molecular_function

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00016026 True 1148 lncRNA 0.39 2 4596503 4599936

Neighbor

gene id symbol gene type direction distance location
XLOC_007665 LO018287.1 coding downstream 39592 4478416 ~ 4556911 (-)
XLOC_007664 guf1 coding downstream 274629 4295933 ~ 4321874 (-)
XLOC_007663 NA coding downstream 308508 4287253 ~ 4287995 (-)
XLOC_007662 frmpd1b coding downstream 323107 4191136 ~ 4273396 (-)
XLOC_007661 si:dkey-185e18.7 coding downstream 419192 4163773 ~ 4177311 (-)
XLOC_007667 NA coding upstream 4451 4604387 ~ 4607757 (-)
XLOC_007668 gabra4 coding upstream 10503 4610439 ~ 4682114 (-)
XLOC_007669 LO018256.1 coding upstream 92813 4692749 ~ 4707172 (-)
XLOC_007670 NA coding upstream 196812 4796748 ~ 4797259 (-)
XLOC_007671 NA coding upstream 232742 4832678 ~ 4844445 (-)
XLOC_007641 CU855896.1 misc downstream 2188663 2407736 ~ 2407840 (-)
XLOC_007640 CU855896.2 misc downstream 2189072 2407328 ~ 2407431 (-)
XLOC_007639 CU855896.3 misc downstream 2189431 2406945 ~ 2407072 (-)
XLOC_007660 BX088718.2 non-coding downstream 433082 4160855 ~ 4163421 (-)
XLOC_007654 NA non-coding downstream 1215200 3362794 ~ 3381303 (-)
XLOC_007653 CABZ01073834.1 non-coding downstream 1237449 3325867 ~ 3359054 (-)
XLOC_007646 NA non-coding downstream 1743248 2851570 ~ 2853255 (-)
XLOC_007672 NA non-coding upstream 262004 4861940 ~ 4884445 (-)

Expression


Co-expression Network