Gene
RNA
| Item | Value |
|---|---|
| gene id | XLOC_007646 |
| gene name | NA |
| gene type | non-coding |
| species | zebrafish (Danio rerio) |
| category of species | model fish |
| Item | Value |
|---|---|
| chromosome id | NC_007125.7 |
| NCBI id | CM002898.2 |
| chromosome length | 52660232 |
| location | 2851570 ~ 2853255 (-) |
| genome version | GRCz11_2017_zebrafish_Genome |
| id | name | namespace |
|---|---|---|
| GO:0050879 | multicellular organismal movement | biological_process |
| GO:0050881 | musculoskeletal movement | biological_process |
| GO:0014819 | regulation of skeletal muscle contraction | biological_process |
| GO:0006936 | muscle contraction | biological_process |
| GO:0006941 | striated muscle contraction | biological_process |
| GO:0003009 | skeletal muscle contraction | biological_process |
| GO:0003012 | muscle system process | biological_process |
| GO:0032501 | multicellular organismal process | biological_process |
| GO:0032502 | developmental process | biological_process |
| GO:0099080 | supramolecular complex | cellular_component |
| GO:0099081 | supramolecular polymer | cellular_component |
| GO:0043292 | contractile fiber | cellular_component |
| GO:0044449 | obsolete contractile fiber part | cellular_component |
| GO:0015629 | actin cytoskeleton | cellular_component |
| GO:0099512 | supramolecular fiber | cellular_component |
| GO:0031674 | I band | cellular_component |
| GO:0030016 | myofibril | cellular_component |
| GO:0030017 | sarcomere | cellular_component |
| GO:0030018 | Z disc | cellular_component |
| GO:0001228 | DNA-binding transcription activator activity, RNA polymerase II-specific | molecular_function |
| GO:0000981 | DNA-binding transcription factor activity, RNA polymerase II-specific | molecular_function |
| GO:0003779 | actin binding | molecular_function |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TCONS_00016338 | True | 1582 | lncRNA | 0.35 | 2 | 2851570 | 2853255 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| XLOC_007644 | etf1a | coding | downstream | 249125 | 2589465 ~ 2602445 (-) |
| XLOC_007643 | fbxw11a | coding | downstream | 263354 | 2549313 ~ 2588216 (-) |
| XLOC_007642 | NA | coding | downstream | 330673 | 2511851 ~ 2520897 (-) |
| XLOC_007638 | si:ch73-233f7.1 | coding | downstream | 450902 | 2382690 ~ 2400668 (-) |
| XLOC_007637 | si:ch73-233f7.3 | coding | downstream | 486809 | 2362347 ~ 2364761 (-) |
| XLOC_007647 | bicc2 | coding | upstream | 88542 | 2941797 ~ 2979878 (-) |
| XLOC_007648 | ndst1a | coding | upstream | 133425 | 2986680 ~ 3032016 (-) |
| XLOC_007649 | slc35a4 | coding | upstream | 209353 | 3062608 ~ 3071638 (-) |
| XLOC_007650 | si:zfos-1069f5.1 | coding | upstream | 270262 | 3123517 ~ 3134836 (-) |
| XLOC_007651 | csf1ra | coding | upstream | 290082 | 3143337 ~ 3180947 (-) |
| XLOC_007641 | CU855896.1 | misc | downstream | 443730 | 2407736 ~ 2407840 (-) |
| XLOC_007640 | CU855896.2 | misc | downstream | 444139 | 2407328 ~ 2407431 (-) |
| XLOC_007639 | CU855896.3 | misc | downstream | 444498 | 2406945 ~ 2407072 (-) |
| XLOC_007625 | NA | non-coding | downstream | 977523 | 1868374 ~ 1874047 (-) |
| XLOC_007624 | NA | non-coding | downstream | 989561 | 1861358 ~ 1862009 (-) |
| XLOC_007623 | NA | non-coding | downstream | 1011668 | 1807336 ~ 1839902 (-) |
| XLOC_007622 | CABZ01029590.1 | non-coding | downstream | 1155728 | 1695724 ~ 1695842 (-) |
| XLOC_007653 | CABZ01073834.1 | non-coding | upstream | 472612 | 3325867 ~ 3359054 (-) |
| XLOC_007654 | NA | non-coding | upstream | 509539 | 3362794 ~ 3381303 (-) |
| XLOC_007660 | BX088718.2 | non-coding | upstream | 1307600 | 4160855 ~ 4163421 (-) |
| XLOC_007663 | NA | non-coding | upstream | 1433998 | 4287253 ~ 4287995 (-) |
| XLOC_007666 | NA | non-coding | upstream | 1743248 | 4596503 ~ 4599936 (-) |
