CI01000013_07286519_07288160


Basic Information

Item Value
gene id CI01000013_07286519_07288160
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000013
NCBI id null
chromosome length 12551977
location 7286442 ~ 7288547 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000013_07286519_07288160.mRNA
CTATAAAAGGAAGTTAATACAAACATCAATTGTTTCACAGATGACACAGAAATGCAATTTTTCTCACATATAACGATATGAAGGGAAAGGACAAATGCACCATAACTCAGAAGGAGATAAAAACGAGCAAATGTAGTAACTCAATCCGCCATTTCCCTATCCCTGCATTAGGCTTCTCCACAGCCCACCTGAATGTCCCCATTCGAGTAAGAATACCCAGGATTCCCGCAGTCATCAATGTGACATCCTGTACCGTATTATTAATGTATGGGACTTCGATTAATGGAGTGATACAGGTATCCTGAAGGCTTAGTCTCTCATCTATAATCCAGTCTTCCCCACAAACTTGAATATTTCATACCGAGTCTCTTTCACTGCTGACACCAAAGGAATGTAAAGCCATGTAGAGTGCAGTACTGTCAAGTTCAGGACCGCGGGTCAGAGAGCGGTGCGGTAGAGACGAACACTTTCTGATCAGTGATTTTTTTCTTTATTATCCATAATGGTCATTCTGTTTCCTGTCACACACGCTTAGTACAGAATCAGAAAAGGATGGAACTTGGTTTTTCAATTTTACACTCCACTGCACTGGTCACACAAGCAATTTACATGCCATTTAAAATGTGTAATCATGCATCAGATGTTATTAAATCAAGTATATTGCTGGAGCTTTACAAATACAAATGTAGGAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000013_07286519_07288160.mRNA True 692 mRNA 0.40 2 7286442 7288547

Neighbor

gene id symbol gene type direction distance location
CI01000013_07277014_07279249 NA coding upstream 7123 7276610 ~ 7279319 (+)
CI01000013_07154745_07159568 PECR coding upstream 126834 7154745 ~ 7159608 (+)
CI01000013_07148102_07150807 PDF coding upstream 135487 7148052 ~ 7150955 (+)
CI01000013_07131096_07141914 NA coding upstream 144400 7130952 ~ 7142042 (+)
CI01000013_07119401_07124434 TSHZ3A coding upstream 161815 7119401 ~ 7124627 (+)
CI01000013_07375912_07390782 MLYCD coding downstream 85271 7373818 ~ 7391003 (+)
CI01000013_07765924_07780475 NA coding downstream 476138 7764685 ~ 7780716 (+)
CI01000013_07791141_07802608 NA coding downstream 502157 7790704 ~ 7802710 (+)
CI01000013_07929832_07935997 GAN coding downstream 641285 7929832 ~ 7935997 (+)
CI01000013_07970614_07989626 CMIP coding downstream 682067 7970614 ~ 7989756 (+)
G82017 NA non-coding upstream 10555 7275677 ~ 7275887 (+)
G82013 NA non-coding upstream 16606 7269617 ~ 7269836 (+)
G82010 NA non-coding upstream 19126 7267094 ~ 7267316 (+)
G81985 NA non-coding upstream 93456 7190949 ~ 7192986 (+)
G81939 NA non-coding upstream 200941 6987893 ~ 7085501 (+)
G82045 NA non-coding downstream 51182 7339729 ~ 7340751 (+)
G82050 NA non-coding downstream 60172 7348719 ~ 7352640 (+)
G82061 NA non-coding downstream 120422 7408969 ~ 7409238 (+)
G82065 NA non-coding downstream 139270 7427817 ~ 7428019 (+)
G82069 NA non-coding downstream 153240 7441787 ~ 7442004 (+)
CI01000013_06076169_06080164 NA other upstream 1204075 6075400 ~ 6081684 (+)
CI01000013_06050285_06059640 NA other upstream 1226946 6049864 ~ 6060269 (+)
G80845 NA other upstream 2450210 4835078 ~ 4836232 (+)
CI01000013_04051081_04064651 NA other upstream 3220613 4050837 ~ 4065829 (+)
G80062 NA other upstream 3701658 3584008 ~ 3584784 (+)
G81994 NA other downstream 47398 7335945 ~ 7338239 (+)
G82168 NA other downstream 739791 8028338 ~ 8041343 (+)
G82581 NA other downstream 2040782 9329329 ~ 9334948 (+)
G84005 NA other downstream 2313064 9601611 ~ 9602235 (+)
G84194 NA other downstream 2742061 10030608 ~ 10036953 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
tiger barb (Puntius tetrazona) G128892 NA non-coding NC_056716.1 CM032085.1 23850756 ~ 23856097 (-)