CI01000013_07970614_07989626 (CMIP)


Basic Information

Item Value
gene id CI01000013_07970614_07989626
gene name CMIP
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000013
NCBI id null
chromosome length 12551977
location 7970614 ~ 7989756 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000013_07970614_07989626.mRNA
CAGACTTGTGATTGATTTCTTGAAAAATGAGATATCATACAAAAGATACTTATCACACCGACTTACTTATCAAGGAAGACAAATCAGCCATCTCAAATCTGCAGCGGAGGGAGCAGGACCTCCGTTGCAGAACAGCCAGTTGCTCTATCACCTAAGAGTGGGGGATCCCACAGGATACATGGAGGCCCCTCTGTCTTACAGCACTATTGAGGACCTGCAGCTGTTGTCCTGGGACAATGCCCCCAAATACTGTGTCCAGCTAAGCTTCCCTGGAGGGACAGTCCTCCTGCAGGCTGCTAACAGCTATCTGCGGGACCAGTGGTTTCACTCTATACAGTGGAAGAAAAAGATCTACAAGTACCGCAAGGTTCTGAATAACCCAAGCCGCTGGGATGTGGTTCTGAAGGAGATCAGGGCCCTGGTGGACATGGCCCTCACTTCACCCCTGCAGGACGAATCCATCCATCAGGCACCACTGCACATTATCTCCACCCTGCTTGCTGAGAACACTAACCTCAGCGCTCAGGACCATGAGAACATCATTGTGGCCATCGCACCCCTGCTGGAGAATAACCACCCTCCTCCTGACCTGTGTGAATTCTTCTGCAAGCACTGTAGGGAGCGTCCTCGGTCGATGGTGGTGATTGAAGTGTTCACTCCTGTGGTTCAGAGAATCCTCAAACACAACATGGTGGGTGTGCGCACTATGGCAGATGTGCTCTCGAATTCACACGTCACCGCACCATCATTTACTGACTCTCCTGGTCTTGTCTTCTCGATCCAGGACTTTGGGAAATGCCCCAGACTCCGTCTCTTTACTCAGGAGTATATTTTGGCTCTGAATGAACTTAACGCTGGCATGGAAGTGGTCAAGAAGTTCATTCACAGCATGCACGGTCCCACCGGACAGTGCCCTCATCCTCGGGTTCTCCCCAATCTCGTGGCGGTGTGCCTTGCTGCCATCTACTCTTGCTACGAAGAGTTCATCAACAGCGAGATCCTAGTGGAGCTGGAACGCAACAACAACACCGCTAACACACTGCGCAAGGCCCCTGCAGAGGGCGACAGCGAGCCCAACCTGATCGACTGTCTACTGGTCAGCCCCGCGCTCAACGCCCTGTCCATTCAGCTGCCTGTCCACGCCGACAGAGTGCTGGGCTGTTTCGCCCTCATCCTCAAGATGCTATCGGACTACGATGACTGGAGACCAGCACTGGCCAGCCTGCTTCAACCCATCCCCTTCCCGAAAGAGAACGGCATGCAGGGGAGAGTACTGACGTGGGCGAGCCGCAGCGGGGCTCTGCAGTGGGCTTGTGGGTATTGGGTGAGGCGTTTCGGGTCCTTTGTGGCTCCTGTAATTGGCCCTGCAGGACAGAGCACATCATTACAGGTCTTCTGCAGAGCCCTGCGGTTGCCACAGGGCCCTTGCACATGCCAAATTTACAAAATCTGCTGTTTTTGTTTTTATAACAGAGAGCTGAAATATGTCATTCAGAGGTTTGCTGAAGATCCCAGACAAGAGGTCCACTCCTGTTTGCTCAGCGTGCGCTCTGGAAAAGACGGGTGGTTCCAGCTGTACAGTCCAGGAGGCGTAGCTTGCGACGATGACGGGGAGTTGTTTGCTAGCATGGTCCACATCCTCATGGGCTCCTGCTATAAGACGAAGAAATTTCTACTGTCGCTGGCTGAAAATAAACTGGGACCCTGCATGCTCCTGGCCCTGCGGGGGAACCAGACCATGGTGGAGATCCTGTGTTTGATGCTGGAGTATAACATCATAGAGAACAAGGACACTCAGCTACAAATCATCTCCACCCTGGAGAGCACCCAGGTCGGCCTGCGCATGTATGAGCAGCTGTGCGACAGGCAGAGGGAACTTAAAGAACTGCAAAGAAAAGGAGGCCCTACTCGACTCACTCTGCCCTCTAAATCTACGGATGCTGACTTGGCTCGTCTGCTGAGCTCTGGTTCCTTTGGCAATCTGGAGAACCTCAGCTTGGCGTTTACCAACGTCACCAGTGCCTGTGCCGAACAGCTCATCAAACTGCCATCCCTCAAACAGCTCAACCTGTGGTCCACCCAGTTTGGAGATGCAGGGCTCCGTCTGCTATCAGAGCATCTGGCCTGTCTGCAGGTTTTGAACTTGTGTGAGACTCCAGTCACAGACGCTGGCCTGCTCTCCCTCAGCTCTATGAAAAGCCTGTGCAGCCTGAATATGAACAGTACTAAACTCACAGCGGACACCTATGAGGACCTGAAGGCCAAACTACCCAATCTAAAGGAAGTGGATGTTCGCTACACAGAGGCGTGGTGAACACAATGCTCGAGGAGATTTATAGACAGAGGAAATCGCTGACACATCATCCGAACACAACATAATCAAGAAACGAGGACTGTATTTATAGGAACCATCGTTCAAACGACAAGGACCTTCTGAAAATATC

Function

symbol description
cmip Predicted to be active in cytosol and nucleoplasm. Orthologous to human CMIP (c-Maf inducing protein).

GO:

id name namespace
GO:0005737 cytoplasm cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000013_07970614_07989626.mRNA True 2444 mRNA 0.52 21 7970614 7989756

Neighbor

gene id symbol gene type direction distance location
CI01000013_07929832_07935997 GAN coding upstream 34617 7929832 ~ 7935997 (+)
CI01000013_07791141_07802608 NA coding upstream 167904 7790704 ~ 7802710 (+)
CI01000013_07765924_07780475 NA coding upstream 189898 7764685 ~ 7780716 (+)
CI01000013_07375912_07390782 MLYCD coding upstream 579611 7373818 ~ 7391003 (+)
CI01000013_07286519_07288160 NA coding upstream 682067 7286442 ~ 7288547 (+)
CI01000013_08013515_08013676 NA coding downstream 23759 8013515 ~ 8014766 (+)
CI01000013_08066408_08071727 KLHL36 coding downstream 75453 8065209 ~ 8071972 (+)
CI01000013_08095012_08097899 CS012 coding downstream 105256 8095012 ~ 8098533 (+)
CI01000013_08101166_08105054 TMEM5 coding downstream 111410 8101166 ~ 8105214 (+)
CI01000013_08107786_08113703 NA coding downstream 116920 8106676 ~ 8113731 (+)
G82339 NA non-coding upstream 17618 7952768 ~ 7952996 (+)
G82338 NA non-coding upstream 17959 7952441 ~ 7952655 (+)
G82337 NA non-coding upstream 18346 7951851 ~ 7952268 (+)
G82286 NA non-coding upstream 148603 7821700 ~ 7822011 (+)
G82079 NA non-coding upstream 165068 7661091 ~ 7805546 (+)
G82146 NA non-coding downstream 21505 8011261 ~ 8059825 (+)
G82157 NA non-coding downstream 25497 8015253 ~ 8016366 (+)
G82184 NA non-coding downstream 84904 8074660 ~ 8077302 (+)
G82178 NA non-coding downstream 93822 8083578 ~ 8087016 (+)
G82162 NA non-coding downstream 238971 8228727 ~ 8230128 (+)
G81994 NA other upstream 632375 7335945 ~ 7338239 (+)
CI01000013_06076169_06080164 NA other upstream 1888247 6075400 ~ 6081684 (+)
CI01000013_06050285_06059640 NA other upstream 1911118 6049864 ~ 6060269 (+)
G80845 NA other upstream 3134382 4835078 ~ 4836232 (+)
CI01000013_04051081_04064651 NA other upstream 3904785 4050837 ~ 4065829 (+)
G82168 NA other downstream 38582 8028338 ~ 8041343 (+)
G82581 NA other downstream 1339573 9329329 ~ 9334948 (+)
G84005 NA other downstream 1611855 9601611 ~ 9602235 (+)
G84194 NA other downstream 2040852 10030608 ~ 10036953 (+)
G84215 NA other downstream 2086698 10076454 ~ 10079336 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
bowfin (Amia calva) AMCG00020622 cmip coding CM030127.1 CM030127.1 26109019 ~ 26129019 (-)